Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p39490 Brassica napus
A05p33570 Brassica napus
Aa31LG8G3030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis
Actinidia08796 Actinidia chinensis
Actinidia15982 Actinidia chinensis
Ah.01g020600 Amaranthus hybridus
AL3G28500 Arabidopsis lyrata
Aqoxy7G03662 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea
AT3G15840 Arabidopsis thaliana
ATR0322G065 Amborella trichopoda
Atru.chr1.2950 Acer truncatum
AUR62011520 Chenopodium quinoa
AUR62016338 Chenopodium quinoa
BcaB06g25691 Brassica carinata
BcaC01g03854 Brassica carinata
BcaC05g28929 Brassica carinata
BolC3t17067H Brassica oleracea
BolC5t33801H Brassica oleracea
BraA03t13099Z Brassica rapa
BraA05t22180Z Brassica rapa
C03p47890 Brassica napus
C05p50560 Brassica napus
CAN.G47.13 Capsicum annuum
CANSAT56G3050 Cannabis sativa
CARHR090930 Cardamine hirsuta
Carub.0003s1558 Capsella rubella
Ca_20445_v3 Cicer arietinum L.
CBR_g38381 Chara braunii
Cc04_g04390 Coffea canephora
CDE07G1654 Ceratophyllum demersum
Cfa001961 Carpinus fangiana
Ciclev10026222m.g Citrus clementina
CiPaw.01G248200 Carya illinoinensis
CiPaw.02G157300 Carya illinoinensis
ClCG09G002940 Citrullus lanatus
COL.COLO4_11949 Corchorus olitorius
Cpa.g.sc10.267 Carica papaya
CsaV3_7G032330 Cucumis sativus L.
CSS0015595 Camellia sinensis var. sinensis
CSS0035863 Camellia sinensis var. sinensis
DCAR_021344 Daucus carota
Dinv38123 Davidia involucrata
Duzib192G0907 Durio zibethinus
ECA247G2617 Erigeron canadensis
EL10Ac9g21901 Beta vulgaris
Eucgr.F03876 Eucalyptus grandis
FAN02G1519 Fragaria x ananassa
FAN05G3690 Fragaria x ananassa
FAN09G3401 Fragaria x ananassa
FAN14G0356 Fragaria x ananassa
FvH4_6g29710 Fragaria vesca
Glyma.07G029900 Glycine max
Glyma.08G213000 Glycine max
Gohir.A06G185600 Gossypium hirsutum
Gohir.D06G192200 Gossypium hirsutum
Gorai.010G225400 Gossypium raimondii
GSVIVG01017340001 Vitis vinifera
HanXRQChr04g0097881 Helianthus annuus
Haze_16559 Corylus avellana
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla
Hund06560 Selenicereus undatus
Lalb_Chr04g0262371 Lupinus albus
Lj3g0018478 Lotus japonicus
Lj9A500T81 Lonicera japonica
Lsat_1_v5_gn_1_34401 Lactuca sativa
Manes.04G112700 Manihot esculenta
Manes.11G056800 Manihot esculenta
Mapoly0024s0088 Marchantia polymorpha
MBI04_g29330_MAGBIO Magnolia biondii
MD17G1212100 Malus domestica
Medtr4g010140 Medicago truncatula
MELO3C023426.2 Cucumis melo
Migut.I00764 Erythranthe guttata
MSTRG.22746 Avicennia marina
Nitab4.5_0003157g0020 Nicotiana tabacum
Nitab4.5_0009497g0010 Nicotiana tabacum
Nn2g12084 Nelumbo nucifera
Nn8g39504 Nelumbo nucifera
Oeu000425.1 Olea europaea
Oeu039429.1 Olea europaea
Os03g0586500 Oryza sativa ssp. japonica
Peaxi162Scf00034g01413 Petunia axillaris
PGR102G1391 Punica granatum
PGSC0003DMG402028626 Solanum tuberosum
Phvul.010G156300 Phaseolus vulgaris
Potri.001G204300 Populus trichocarpa
Pp3c15_11500 Physcomitrium patens
Pp3c22_2660 Physcomitrium patens
Pp3c9_11540 Physcomitrium patens
Prupe.3G087300 Prunus persica
Psat7g257120 Pisum sativum
PSO210G3245 Papaver somniferum
PSO210G5365 Papaver somniferum
QL05p029818 Quercus lobata
QL05p029832 Quercus lobata
QL05p029868 Quercus lobata
RcHm_v2.0_Chr2g0135411 Rosa chinensis
Rhsim12G0191200 Rhododendron simsii
Sabra01G0157400 Salix brachista
SalBow2G1302 Salvia bowleyana
Sed0007474 Sechium edule
Sed0012965 Sechium edule
SEGI_16074 Sequoiadendron giganteum
SMO331G0083 Selaginella moellendorffii
Solyc12g042770.3 Solanum lycopersicum
Sopen12g021950 Solanum pennellii
Sp3g14150 Schrenkiella parvula
TAR383G1051 Trochodendron aralioides
THA.LOC104810510 Tarenaya hassleriana
Thecc.06G024200 Theobroma cacao
Thecc.06G024600 Theobroma cacao
Thecc.K0004600 Theobroma cacao
Thhalv10022443m.g Eutrema salsugineum
TWI12G0141 Tripterygium wilfordii
unitig_27.g24949 Utricularia gibba
vmacro16897 Vaccinium macrocarpon
VMungo0331G1912 Vigna mungo
Zm00001eb049190 Zea mays
Zm00001eb219530 Zea mays

User provided reference genes

Program Settings