Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06150 Brassica napus
Aa31LG2G17740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5616 Anthoceros agrestis
Actinidia14601 Actinidia chinensis
Actinidia15670 Actinidia chinensis
AL7G19640 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea
AT4G32190 Arabidopsis thaliana
ATR0800G069 Amborella trichopoda
Atru.chr7.2443 Acer truncatum
AUR62012410 Chenopodium quinoa
AUR62031532 Chenopodium quinoa
BcaC03g14918 Brassica carinata
BcaC03g14920 Brassica carinata
BcaC09g52004 Brassica carinata
BcaNung03144 Brassica carinata
BolC1t00672H Brassica oleracea
BraA10t43273Z Brassica rapa
C01p06780 Brassica napus
C02p23990 Brassica napus
C02p24000 Brassica napus
C02p24100 Brassica napus
C02p24120 Brassica napus
CAN.G117.5 Capsicum annuum
CANSAT35G0532 Cannabis sativa
CARHR115700 Cardamine hirsuta
CARHR240120 Cardamine hirsuta
Carub.0007s0836 Capsella rubella
Ca_13033_v3 Cicer arietinum L.
CBR_g53711 Chara braunii
Cc08_g00500 Coffea canephora
CDE06G1662 Ceratophyllum demersum
CDE06G2618 Ceratophyllum demersum
CDE07G0223 Ceratophyllum demersum
Cfa013134 Carpinus fangiana
Ciclev10007642m.g Citrus clementina
CiPaw.07G224100 Carya illinoinensis
ClCG05G016810 Citrullus lanatus
COL.COLO4_18870 Corchorus olitorius
Cpa.g.sc217.10 Carica papaya
CsaV3_3G046330 Cucumis sativus L.
CSS0036831 Camellia sinensis var. sinensis
CSS0048874 Camellia sinensis var. sinensis
DCAR_001538 Daucus carota
Dinv08633 Davidia involucrata
Duzib168G2139 Durio zibethinus
Duzib187G1366 Durio zibethinus
EL10Ac2g04201 Beta vulgaris
Eucgr.C01728 Eucalyptus grandis
FAN15G0163 Fragaria x ananassa
FAN15G2294 Fragaria x ananassa
FAN15G3016 Fragaria x ananassa
FAN15G3111 Fragaria x ananassa
FAN20G2434 Fragaria x ananassa
FAN24G1512 Fragaria x ananassa
FAN27G1287 Fragaria x ananassa
FvH4_2g28941 Fragaria vesca
Glyma.14G115900 Glycine max
Glyma.14G115951 Glycine max
Glyma.17G211900 Glycine max
Gohir.A07G028900 Gossypium hirsutum
Gohir.D07G032900 Gossypium hirsutum
Gorai.001G034500 Gossypium raimondii
GSVIVG01035871001 Vitis vinifera
HanXRQChr16g0510771 Helianthus annuus
Haze_21503 Corylus avellana
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla
Hund04507 Selenicereus undatus
Lalb_Chr24g0402151 Lupinus albus
Lj5g0021919 Lotus japonicus
Lj8P705T28 Lonicera japonica
Lsat_1_v5_gn_5_30240 Lactuca sativa
Manes.16G122900 Manihot esculenta
Mapoly0009s0162 Marchantia polymorpha
MD15G1126300 Malus domestica
Medtr1g012620 Medicago truncatula
MELO3C003706.2 Cucumis melo
Migut.A00033 Erythranthe guttata
MSTRG.11610 Avicennia marina
Nitab4.5_0002042g0070 Nicotiana tabacum
Nitab4.5_0002408g0020 Nicotiana tabacum
Nn8g39522 Nelumbo nucifera
Oeu033132.1 Olea europaea
Oeu053117.1 Olea europaea
Os02g0186400 Oryza sativa ssp. japonica
Peaxi162Scf01131g00117 Petunia axillaris
PGR031G1896 Punica granatum
PGSC0003DMG400004306 Solanum tuberosum
Phvul.001G050600 Phaseolus vulgaris
Potri.006G255800 Populus trichocarpa
Potri.018G026300 Populus trichocarpa
Prupe.1G482200 Prunus persica
Psat6g029040 Pisum sativum
PSO017G0123 Papaver somniferum
PSO170G1391 Papaver somniferum
PSO170G2190 Papaver somniferum
QL02p021457 Quercus lobata
RcHm_v2.0_Chr6g0297771 Rosa chinensis
Rhsim07G0159500 Rhododendron simsii
Sabra06G0200100 Salix brachista
Sabra18G0028800 Salix brachista
Sabra18G0029000 Salix brachista
SalBow4G3177 Salvia bowleyana
Sc09g0008160 Simmondsia chinensis
Sed0003255 Sechium edule
SEGI_00734 Sequoiadendron giganteum
SEGI_28581 Sequoiadendron giganteum
SMO228G0205 Selaginella moellendorffii
Solyc08g022030.3 Solanum lycopersicum
Sopen08g011590 Solanum pennellii
Sp7g29980 Schrenkiella parvula
TAR625G1222 Trochodendron aralioides
TAR636G0610 Trochodendron aralioides
TAR636G3563 Trochodendron aralioides
THA.LOC104818618 Tarenaya hassleriana
Thecc.09G023300 Theobroma cacao
Thhalv10024464m.g Eutrema salsugineum
TPR.G15679 Trifolium pratense
TWI34G1016 Tripterygium wilfordii
unitig_748.g8080 Utricularia gibba
vmacro05173 Vaccinium macrocarpon
VMungo0647G1945 Vigna mungo
Zm00001eb206500 Zea mays

User provided reference genes

Program Settings