Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p68650 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_368.542 Anthoceros agrestis
Actinidia05697 Actinidia chinensis
Ah.04g160290 Amaranthus hybridus
AL1G65580 Arabidopsis lyrata
Aqoxy5G00493 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7ESY4D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHU2GX Arachis hypogaea
AT1G55000 Arabidopsis thaliana
ATR0332G062 Amborella trichopoda
Atru.chr2.393 Acer truncatum
AUR62000819 Chenopodium quinoa
AUR62005152 Chenopodium quinoa
BcaC02g10755 Brassica carinata
BcaC06g31763 Brassica carinata
BolC4t24060H Brassica oleracea
BraSC39t46193Z Brassica rapa
C04p25420 Brassica napus
CAN.G1034.41 Capsicum annuum
CANSAT54G1557 Cannabis sativa
CARHR287540 Cardamine hirsuta
Carub.0002s0818 Capsella rubella
Ca_10114_v3 Cicer arietinum L.
Cc02_g33350 Coffea canephora
CDE02G2742 Ceratophyllum demersum
Cfa006594 Carpinus fangiana
Cfa006595 Carpinus fangiana
Ciclev10002177m.g Citrus clementina
CiPaw.07G020700 Carya illinoinensis
ClCG02G015760 Citrullus lanatus
COL.COLO4_10389 Corchorus olitorius
COL.COLO4_13456 Corchorus olitorius
Cpa.g.sc48.61 Carica papaya
Cre16.g667100 Chlamydomonas reinhardtii
CsaV3_2G005340 Cucumis sativus L.
CSS0034260 Camellia sinensis var. sinensis
CSS0037657 Camellia sinensis var. sinensis
DCAR_029409 Daucus carota
Dinv23938 Davidia involucrata
Duzib106G1877 Durio zibethinus
Duzib177G0348 Durio zibethinus
ECA232G4325 Erigeron canadensis
EL10Ac4g09358 Beta vulgaris
Eucgr.B01859 Eucalyptus grandis
Eucgr.B01946 Eucalyptus grandis
Eucgr.B01949 Eucalyptus grandis
FAN02G2504 Fragaria x ananassa
FAN05G1000 Fragaria x ananassa
FAN05G3282 Fragaria x ananassa
FAN09G3808 Fragaria x ananassa
FAN14G2531 Fragaria x ananassa
FvH4_6g06020 Fragaria vesca
Glyma.10G154000 Glycine max
Glyma.20G234300 Glycine max
Gohir.A08G210900 Gossypium hirsutum
Gohir.D08G227700 Gossypium hirsutum
Gorai.004G241900 Gossypium raimondii
GSVIVG01000081001 Vitis vinifera
HanXRQChr16g0524621 Helianthus annuus
Haze_04190 Corylus avellana
Hma1.2p1_0928F.1_g237740 Hydrangea macrophylla
HPP92_020377 Vanilla planifolia
Hund21694 Selenicereus undatus
Lalb_Chr21g0310681 Lupinus albus
Lj5g0015213 Lotus japonicus
Lj9A85G78 Lonicera japonica
Lj9A86G16 Lonicera japonica
Lsat_1_v5_gn_9_123421 Lactuca sativa
Manes.08G120400 Manihot esculenta
MBI04_g29616_MAGBIO Magnolia biondii
MD04G1204800 Malus domestica
MD10G1167700 Malus domestica
MD12G1218500 Malus domestica
Medtr1g082950 Medicago truncatula
Migut.N01987 Erythranthe guttata
Migut.N02012 Erythranthe guttata
MSTRG.5100 Avicennia marina
Nitab4.5_0000137g0140 Nicotiana tabacum
Nitab4.5_0005541g0070 Nicotiana tabacum
Nn1g02269 Nelumbo nucifera
Nn4g26277 Nelumbo nucifera
Oeu010909.1 Olea europaea
Os03g0699600 Oryza sativa ssp. japonica
Peaxi162Scf00037g00513 Petunia axillaris
PGR083G0891 Punica granatum
PGSC0003DMG400024687 Solanum tuberosum
Phvul.007G179700 Phaseolus vulgaris
Potri.005G032100 Populus trichocarpa
Potri.013G021600 Populus trichocarpa
Pp3c16_5370 Physcomitrium patens
Prupe.6G324800 Prunus persica
Psat6g150480 Pisum sativum
PSO210G7816 Papaver somniferum
QL03p007116 Quercus lobata
QL03p007137 Quercus lobata
QL03p007144 Quercus lobata
QL03p007970 Quercus lobata
QL03p007977 Quercus lobata
RcHm_v2.0_Chr3g0454981 Rosa chinensis
Rhsim07G0185100 Rhododendron simsii
RhsimUnG0226900 Rhododendron simsii
Sabra05G0034600 Salix brachista
Sabra13G0024000 Salix brachista
Sc06g0003280 Simmondsia chinensis
Sed0005627 Sechium edule
SEGI_28170 Sequoiadendron giganteum
SGA_v2.0_scaffold81G26063 Striga asiatica
SMO356G0643 Selaginella moellendorffii
Solyc01g099130.3 Solanum lycopersicum
Sopen01g042690 Solanum pennellii
SpUn0004_0090 Schrenkiella parvula
TAR365G0270 Trochodendron aralioides
TAR636G1821 Trochodendron aralioides
THA.LOC104820863 Tarenaya hassleriana
Thecc.05G302400 Theobroma cacao
Thhalv10023646m.g Eutrema salsugineum
Thhalv10024156m.g Eutrema salsugineum
TPR.G6113 Trifolium pratense
TWI56G0424 Tripterygium wilfordii
vmacro05011 Vaccinium macrocarpon
vmacro23281 Vaccinium macrocarpon
vmacro23282 Vaccinium macrocarpon
VMungo0720G1765 Vigna mungo
Zm00001eb054020 Zea mays

User provided reference genes

Program Settings