Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p33430 Brassica napus
A06p11260 Brassica napus
A08p31670 Brassica napus
A09p61510 Brassica napus
Aa31LG4G200 Aethionema arabicum
Aa31LG8G3190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2290 Anthoceros agrestis
AL1G27360 Arabidopsis lyrata
AL3G28690 Arabidopsis lyrata
AL810U10020 Arabidopsis lyrata
Aqoxy7G01686 Aquilegia oxysepala
Aqoxy7G03790 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6441EL Arachis hypogaea
AT1G15270 Arabidopsis thaliana
AT3G16040 Arabidopsis thaliana
ATR0724G030 Amborella trichopoda
Atru.chr1.3302 Acer truncatum
BcaB03g13069 Brassica carinata
BcaC05g25455 Brassica carinata
BcaC05g25459 Brassica carinata
BcaC05g28917 Brassica carinata
BcaC07g38776 Brassica carinata
BcaC07g41515 Brassica carinata
BcaNung06587 Brassica carinata
BolC5t30076H Brassica oleracea
BolC8t49333H Brassica oleracea
BolC8t52055H Brassica oleracea
BraA06t24306Z Brassica rapa
BraA08t35089Z Brassica rapa
BraA09t41524Z Brassica rapa
C05p50430 Brassica napus
C08p17070 Brassica napus
C08p45090 Brassica napus
CAN.G144.3 Capsicum annuum
CAN.G710.59 Capsicum annuum
CANSAT56G0242 Cannabis sativa
CARHR015790 Cardamine hirsuta
CARHR091200 Cardamine hirsuta
Carub.0001s1503 Capsella rubella
Carub.0003s1577 Capsella rubella
Cc04_g03270 Coffea canephora
Ciclev10026914m.g Citrus clementina
CiPaw.01G238100 Carya illinoinensis
CiPaw.02G150500 Carya illinoinensis
ClCG02G009660 Citrullus lanatus
ClCG05G003220 Citrullus lanatus
ClCG11G012700 Citrullus lanatus
COL.COLO4_30395 Corchorus olitorius
Cpa.g.sc41.8 Carica papaya
Cre10.g438600 Chlamydomonas reinhardtii
CsaV3_3G010850 Cucumis sativus L.
CSS0028003 Camellia sinensis var. sinensis
DCAR_002649 Daucus carota
DCAR_007563 Daucus carota
DCAR_023056 Daucus carota
DCAR_026325 Daucus carota
Dinv38039 Davidia involucrata
EL10Ac9g22008 Beta vulgaris
Eucgr.J02983 Eucalyptus grandis
FAN02G0035 Fragaria x ananassa
FAN05G1876 Fragaria x ananassa
FAN09G4522 Fragaria x ananassa
FAN14G4157 Fragaria x ananassa
FAN19G1924 Fragaria x ananassa
FAN26G3442 Fragaria x ananassa
FvH4_1g16510 Fragaria vesca
Glyma.07G005600 Glycine max
Glyma.08G206000 Glycine max
Glyma.14G136351 Glycine max
Glyma.20G047300 Glycine max
Gohir.A09G082600 Gossypium hirsutum
Gohir.D09G082500 Gossypium hirsutum
Gorai.006G098200 Gossypium raimondii
GSVIVG01017091001 Vitis vinifera
HanXRQChr04g0096071 Helianthus annuus
HanXRQChr04g0096081 Helianthus annuus
HanXRQChr12g0376701 Helianthus annuus
Haze_16401 Corylus avellana
Hma1.2p1_2039F.1_g312170 Hydrangea macrophylla
Hund06616 Selenicereus undatus
Lalb_Chr01g0012721 Lupinus albus
Lalb_Chr04g0262751 Lupinus albus
Lj3g0004039 Lotus japonicus
Lj3g0012949 Lotus japonicus
Lj5A59T64 Lonicera japonica
Lsat_1_v5_gn_1_35180 Lactuca sativa
Lsat_1_v5_gn_1_38621 Lactuca sativa
Lsat_1_v5_gn_5_130340 Lactuca sativa
Manes.04G124600 Manihot esculenta
Mapoly0091s0070 Marchantia polymorpha
MBI06_g06678_MAGBIO Magnolia biondii
MCO03G251 Micromonas commoda
MD17G1194100 Malus domestica
Medtr4g012800 Medicago truncatula
Migut.D01026 Erythranthe guttata
Migut.I00879 Erythranthe guttata
Nitab4.5_0002859g0060 Nicotiana tabacum
Nitab4.5_0004241g0020 Nicotiana tabacum
Nn2g11755 Nelumbo nucifera
Oeu063955.1 Olea europaea
Peaxi162Scf00034g00611 Petunia axillaris
PGSC0003DMG400007579 Solanum tuberosum
Phvul.010G150000 Phaseolus vulgaris
Potri.001G181800 Populus trichocarpa
Pp3c23_11500 Physcomitrium patens
Pp3c24_10010 Physcomitrium patens
Prupe.3G069900 Prunus persica
Psat7g250440 Pisum sativum
RcHm_v2.0_Chr2g0106421 Rosa chinensis
RcHm_v2.0_Chr2g0138111 Rosa chinensis
SalBow2G2995 Salvia bowleyana
Sc12g0009320 Simmondsia chinensis
Sed0004760 Sechium edule
Sed0026778 Sechium edule
SGA_v2.0_scaffold37G14829 Striga asiatica
Solyc12g043160.3 Solanum lycopersicum
Sp1g13580 Schrenkiella parvula
Sp3g14390 Schrenkiella parvula
TAR626G0232 Trochodendron aralioides
Thecc.06G089800 Theobroma cacao
Thhalv10009202m.g Eutrema salsugineum
Thhalv10022282m.g Eutrema salsugineum
unitig_27.g25076 Utricularia gibba
Zm00001eb225700 Zea mays

User provided reference genes

Program Settings