Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p27150 Brassica napus
Aa31LG1G5580 Aethionema arabicum
Aa31LG2G11890 Aethionema arabicum
Actinidia23608 Actinidia chinensis
Ah.06g190130 Amaranthus hybridus
AL1G65240 Arabidopsis lyrata
Aqoxy2G03216 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea
AT1G54780 Arabidopsis thaliana
ATR0626G312 Amborella trichopoda
Atru.chr2.491 Acer truncatum
AUR62000865 Chenopodium quinoa
AUR62005110 Chenopodium quinoa
BcaB04g20144 Brassica carinata
BcaC09g49606 Brassica carinata
BolC1t03427H Brassica oleracea
BraA01t02850Z Brassica rapa
C01p34560 Brassica napus
CAN.G1134.18 Capsicum annuum
CANSAT54G1414 Cannabis sativa
CARHR055910 Cardamine hirsuta
Carub.0002s0864 Capsella rubella
Ca_10088_v3 Cicer arietinum L.
CBR_g30711 Chara braunii
Cc02_g32670 Coffea canephora
CDE02G0677 Ceratophyllum demersum
CDE08G0960 Ceratophyllum demersum
Cfa006543 Carpinus fangiana
Ciclev10002001m.g Citrus clementina
CiPaw.08G166800 Carya illinoinensis
ClCG02G016070 Citrullus lanatus
COL.COLO4_13518 Corchorus olitorius
Cpa.g.sc48.9 Carica papaya
Cre03.g182150 Chlamydomonas reinhardtii
CsaV3_2G004910 Cucumis sativus L.
CSS0022908 Camellia sinensis var. sinensis
DCAR_029435 Daucus carota
Dinv22903 Davidia involucrata
Dinv23978 Davidia involucrata
Duzib128G1696 Durio zibethinus
Duzib177G0710 Durio zibethinus
ECA232G3707 Erigeron canadensis
EL10Ac4g09303 Beta vulgaris
Eucgr.H04456 Eucalyptus grandis
FAN02G3793 Fragaria x ananassa
FAN05G0060 Fragaria x ananassa
FAN05G2936 Fragaria x ananassa
FAN09G2836 Fragaria x ananassa
FAN14G2526 Fragaria x ananassa
FAN14G3791 Fragaria x ananassa
FvH4_6g05320 Fragaria vesca
Glyma.10G157100 Glycine max
Glyma.20G231600 Glycine max
Gohir.A11G262900 Gossypium hirsutum
Gohir.D11G272900 Gossypium hirsutum
Gorai.007G294200 Gossypium raimondii
GSVIVG01000004001 Vitis vinifera
HanXRQChr09g0258731 Helianthus annuus
HanXRQChr15g0486581 Helianthus annuus
Haze_01725 Corylus avellana
Haze_04238 Corylus avellana
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla
HPP92_006953 Vanilla planifolia
Lalb_Chr02g0148391 Lupinus albus
Lalb_Chr02g0148401 Lupinus albus
Lalb_Chr06g0167821 Lupinus albus
Lj5g0006935 Lotus japonicus
Lj9A681T37 Lonicera japonica
Lsat_1_v5_gn_8_116020 Lactuca sativa
Manes.09G163500 Manihot esculenta
Mapoly0079s0006 Marchantia polymorpha
MBI19_g27532_MAGBIO Magnolia biondii
MCO01G659 Micromonas commoda
MD04G1209400 Malus domestica
MD12G1224000 Malus domestica
Medtr1g082420 Medicago truncatula
MELO3C004307.2 Cucumis melo
Migut.C00218 Erythranthe guttata
Migut.H00517 Erythranthe guttata
MSTRG.2929 Avicennia marina
Nitab4.5_0004940g0060 Nicotiana tabacum
Nitab4.5_0007238g0010 Nicotiana tabacum
Nn1g02093 Nelumbo nucifera
Nn4g26146 Nelumbo nucifera
Oeu032896.2 Olea europaea
Oeu043843.1 Olea europaea
Os05g0401100 Oryza sativa ssp. japonica
Peaxi162Scf00434g00329 Petunia axillaris
PGR031G2709 Punica granatum
PGSC0003DMG402028574 Solanum tuberosum
Phvul.007G182400 Phaseolus vulgaris
Potri.005G038700 Populus trichocarpa
Potri.013G026400 Populus trichocarpa
Pp3c11_19220 Physcomitrium patens
Pp3c7_6980 Physcomitrium patens
PRCOL_00003436 Prasinoderma coloniale
Prupe.6G330400 Prunus persica
Psat6g148880 Pisum sativum
PSO170G0754 Papaver somniferum
PSO407G0317 Papaver somniferum
QL03p004338 Quercus lobata
RcHm_v2.0_Chr3g0454061 Rosa chinensis
Rhsim07G0179600 Rhododendron simsii
Sabra05G0037800 Salix brachista
SalBow1G1453 Salvia bowleyana
Sc16g0008340 Simmondsia chinensis
Sed0000831 Sechium edule
SEGI_37406 Sequoiadendron giganteum
SGA_v2.0_scaffold204G41638 Striga asiatica
SMO329G0005 Selaginella moellendorffii
SMO353G0282 Selaginella moellendorffii
Solyc01g098640.3 Solanum lycopersicum
Sopen01g042190 Solanum pennellii
SpUn0002_0460 Schrenkiella parvula
TAR362G1050 Trochodendron aralioides
THA.LOC104823736 Tarenaya hassleriana
Thecc.05G308500 Theobroma cacao
Thhalv10023632m.g Eutrema salsugineum
TPR.G2722 Trifolium pratense
TWI12G1406 Tripterygium wilfordii
Zm00001eb346800 Zea mays

User provided reference genes

Program Settings