Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p33470 Brassica napus
Aa31LG2G3160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1769 Anthoceros agrestis
Ah.10g037930 Amaranthus hybridus
AL2G22970 Arabidopsis lyrata
AL2G23010 Arabidopsis lyrata
AL2G24420 Arabidopsis lyrata
Aqoxy3G04032 Aquilegia oxysepala
AT1G66520 Arabidopsis thaliana
ATR0686G130 Amborella trichopoda
Atru.chr1.1777 Acer truncatum
AUR62023199 Chenopodium quinoa
AUR62026045 Chenopodium quinoa
AUR62032836 Chenopodium quinoa
BcaB03g15262 Brassica carinata
BcaC08g46048 Brassica carinata
BolC6t39074H Brassica oleracea
BraA07t30973Z Brassica rapa
C06p39860 Brassica napus
CAN.G625.77 Capsicum annuum
CANSAT78G1038 Cannabis sativa
CARHR058440 Cardamine hirsuta
CARHR058540 Cardamine hirsuta
Carub.0002s1254 Capsella rubella
Ca_24327_v3 Cicer arietinum L.
Ca_29143_v3 Cicer arietinum L.
CBR_g48389 Chara braunii
Cc07_g08250 Coffea canephora
Cfa007858 Carpinus fangiana
Ciclev10013714m.g Citrus clementina
CiPaw.03G067700 Carya illinoinensis
ClCG05G010820 Citrullus lanatus
COL.COLO4_27119 Corchorus olitorius
Cpa.g.sc116.15 Carica papaya
Cre09.g392729 Chlamydomonas reinhardtii
Cre12.g560550 Chlamydomonas reinhardtii
CsaV3_3G017690 Cucumis sativus L.
CSS0049075 Camellia sinensis var. sinensis
DCAR_025879 Daucus carota
Dinv14869 Davidia involucrata
Duzib133G0980 Durio zibethinus
ECA232G0076 Erigeron canadensis
EL10Ac2g04491 Beta vulgaris
Eucgr.F02693 Eucalyptus grandis
FAN15G2201 Fragaria x ananassa
FAN20G0335 Fragaria x ananassa
FAN24G3364 Fragaria x ananassa
FvH4_2g04020 Fragaria vesca
Glyma.05G001000 Glycine max
Gohir.A07G076300 Gossypium hirsutum
Gohir.D07G080800 Gossypium hirsutum
Gorai.001G085900 Gossypium raimondii
GSVIVG01030886001 Vitis vinifera
HanXRQChr01g0030591 Helianthus annuus
HanXRQChr03g0068601 Helianthus annuus
HanXRQChr09g0262341 Helianthus annuus
HanXRQChr16g0531301 Helianthus annuus
Haze_14211 Corylus avellana
HPP92_024416 Vanilla planifolia
Hund16200 Selenicereus undatus
Lalb_Chr03g0035001 Lupinus albus
Lj2A436G33 Lonicera japonica
Lj2g0003354 Lotus japonicus
Lsat_1_v5_gn_4_154881 Lactuca sativa
Manes.01G114900 Manihot esculenta
Mapoly0147s0006 Marchantia polymorpha
Mapoly0147s0008 Marchantia polymorpha
MBI08_g39920_MAGBIO Magnolia biondii
MBI13_g41159_MAGBIO Magnolia biondii
MBI16_g24204_MAGBIO Magnolia biondii
MBI16_g44113_MAGBIO Magnolia biondii
MCO14G351 Micromonas commoda
MD09G1260600 Malus domestica
Medtr6g003980 Medicago truncatula
MELO3C020307.2 Cucumis melo
Migut.L00473 Erythranthe guttata
MSTRG.2784 Avicennia marina
Nitab4.5_0002456g0120 Nicotiana tabacum
Nitab4.5_0003598g0080 Nicotiana tabacum
Nn3g18189 Nelumbo nucifera
Oeu030807.1 Olea europaea
Os01g0687500 Oryza sativa ssp. japonica
Peaxi162Scf00803g00420 Petunia axillaris
PGR042G1412 Punica granatum
PGSC0003DMG400030600 Solanum tuberosum
Phvul.004G001300 Phaseolus vulgaris
Potri.017G123300 Populus trichocarpa
Pp3c16_620 Physcomitrium patens
PRCOL_00006745 Prasinoderma coloniale
Prupe.3G152400 Prunus persica
Psat1g052240 Pisum sativum
PSO339G1787 Papaver somniferum
PSO384G0683 Papaver somniferum
QL12p004163 Quercus lobata
RcHm_v2.0_Chr3g0491591 Rosa chinensis
RcHm_v2.0_Chr3g0493551 Rosa chinensis
Rhsim08G0084800 Rhododendron simsii
Rhsim08G0085000 Rhododendron simsii
Sabra17G0101600 Salix brachista
Sabra17G0104300 Salix brachista
SalBow3G1843 Salvia bowleyana
Sc11g0008580 Simmondsia chinensis
Sed0012276 Sechium edule
SEGI_18017 Sequoiadendron giganteum
SEGI_25003 Sequoiadendron giganteum
SEGI_40413 Sequoiadendron giganteum
SGA_v2.0_scaffold174G39268 Striga asiatica
SGA_v2.0_scaffold9G04970 Striga asiatica
SHI30139 Sapria himalayana
SMO147G0011 Selaginella moellendorffii
Solyc02g091290.3 Solanum lycopersicum
Sopen02g035910 Solanum pennellii
Sp5g21570 Schrenkiella parvula
TAR206G0005 Trochodendron aralioides
TAR629G1190 Trochodendron aralioides
THA.LOC104822436 Tarenaya hassleriana
Thecc.04G123200 Theobroma cacao
Thhalv10019000m.g Eutrema salsugineum
TPR.G25248 Trifolium pratense
TWI74G1556 Tripterygium wilfordii
unitig_32.g11755 Utricularia gibba
vmacro18058 Vaccinium macrocarpon
VMungo0464G0110 Vigna mungo
Zm00001eb156380 Zea mays

User provided reference genes

Program Settings