Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p03510 Brassica napus
A10p28660 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_344.1629 Anthoceros agrestis
Actinidia04843 Actinidia chinensis
Actinidia09250 Actinidia chinensis
Actinidia12838 Actinidia chinensis
Ah.02g113920 Amaranthus hybridus
AL6G18220 Arabidopsis lyrata
AL8G37860 Arabidopsis lyrata
Aqoxy3G03581 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4TX3DC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LPT8KM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TF9MBQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UPMP97 Arachis hypogaea
AT5G07890 Arabidopsis thaliana
AT5G61200 Arabidopsis thaliana
ATR0064G033 Amborella trichopoda
Atru.chr9.377 Acer truncatum
AUR62008498 Chenopodium quinoa
AUR62021594 Chenopodium quinoa
BcaB01g05645 Brassica carinata
BcaC02g08698 Brassica carinata
BcaC02g08699 Brassica carinata
BcaC02g08700 Brassica carinata
BcaNung06903 Brassica carinata
BolC3t12932H Brassica oleracea
BolC9t59643H Brassica oleracea
BraA03t09701Z Brassica rapa
C03p03950 Brassica napus
C04p51590 Brassica napus
C04p51600 Brassica napus
C04p51610 Brassica napus
C04p51620 Brassica napus
C09p68980 Brassica napus
CAN.G172.10 Capsicum annuum
CANSAT80G0413 Cannabis sativa
CANSAT80G1113 Cannabis sativa
CARHR205310 Cardamine hirsuta
Carub.0006s0678 Capsella rubella
Carub.0008s2186 Capsella rubella
Ca_21789_v3 Cicer arietinum L.
Cc00_g02320 Coffea canephora
CDE06G0998 Ceratophyllum demersum
Cfa019299 Carpinus fangiana
Ciclev10020474m.g Citrus clementina
CiPaw.11G050000 Carya illinoinensis
ClCG04G011930 Citrullus lanatus
ClCG04G011940 Citrullus lanatus
COL.COLO4_22753 Corchorus olitorius
Cpa.g.sc94.9 Carica papaya
CsaV3_1G005840 Cucumis sativus L.
CsaV3_1G005860 Cucumis sativus L.
DCAR_026015 Daucus carota
Dinv38786 Davidia involucrata
Duzib068G0538 Durio zibethinus
Duzib084G0027 Durio zibethinus
ECA232G2526 Erigeron canadensis
EL10Ac5g11100 Beta vulgaris
Eucgr.B00571 Eucalyptus grandis
FAN08G0388 Fragaria x ananassa
FAN13G1588 Fragaria x ananassa
FAN18G2755 Fragaria x ananassa
FvH4_5g14277 Fragaria vesca
Glyma.01G017150 Glycine max
Glyma.05G022800 Glycine max
Glyma.17G076800 Glycine max
Gohir.A12G180800 Gossypium hirsutum
Gohir.D12G183500 Gossypium hirsutum
Gorai.008G196800 Gossypium raimondii
GSVIVG01007923001 Vitis vinifera
HanXRQChr09g0270151 Helianthus annuus
HanXRQChr16g0502261 Helianthus annuus
Haze_07680 Corylus avellana
Hund02605 Selenicereus undatus
Lalb_Chr13g0302951 Lupinus albus
Lj4g0024886 Lotus japonicus
Lj5A105T60 Lonicera japonica
Lsat_1_v5_gn_4_110201 Lactuca sativa
Manes.14G084000 Manihot esculenta
MD14G1208800 Malus domestica
Medtr4g109330 Medicago truncatula
MELO3C002015.2 Cucumis melo
Migut.I00315 Erythranthe guttata
MSTRG.22971 Avicennia marina
Nitab4.5_0001961g0070 Nicotiana tabacum
Nitab4.5_0005160g0050 Nicotiana tabacum
Nn4g23374 Nelumbo nucifera
Oeu014392.1 Olea europaea
Os07g0598700 Oryza sativa ssp. japonica
Peaxi162Scf00106g00081 Petunia axillaris
PGR083G0341 Punica granatum
PGSC0003DMG400012806 Solanum tuberosum
Phvul.L001604 Phaseolus vulgaris
Potri.015G048900 Populus trichocarpa
Pp3c1_15110 Physcomitrium patens
Prupe.5G201100 Prunus persica
Psat4g048440 Pisum sativum
PSO017G5610 Papaver somniferum
PSO302G0195 Papaver somniferum
PSO478G4763 Papaver somniferum
QL10p018676 Quercus lobata
RcHm_v2.0_Chr7g0182601 Rosa chinensis
Rhsim08G0148500 Rhododendron simsii
Sabra15G0078400 Salix brachista
SalBow5G3762 Salvia bowleyana
Sc04g0003080 Simmondsia chinensis
Sed0008489 Sechium edule
SEGI_28191 Sequoiadendron giganteum
SEGI_37085 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10967 Striga asiatica
Solyc12g036300.3 Solanum lycopersicum
Sopen12g016610 Solanum pennellii
Sp6g35060 Schrenkiella parvula
TAR629G2567 Trochodendron aralioides
THA.LOC104818336 Tarenaya hassleriana
Thecc.03G097200 Theobroma cacao
Thhalv10013673m.g Eutrema salsugineum
TPR.G2042 Trifolium pratense
TWI81G1094 Tripterygium wilfordii
vmacro17591 Vaccinium macrocarpon
VMungo1215G3198 Vigna mungo
Zm00001eb108440 Zea mays

User provided reference genes

Program Settings