Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p05410 Brassica napus
Aa31LG11G9460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis
Actinidia35561 Actinidia chinensis
Ah.06g189770 Amaranthus hybridus
AL6G39250 Arabidopsis lyrata
Aqoxy5G00730 Aquilegia oxysepala
Aqoxy601s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea
AT5G27710 Arabidopsis thaliana
ATR0796G153 Amborella trichopoda
Atru.chr2.29 Acer truncatum
AUR62000764 Chenopodium quinoa
AUR62005205 Chenopodium quinoa
BcaB04g19684 Brassica carinata
BcaB07g32734 Brassica carinata
BcaC04g23642 Brassica carinata
BolC9t53515H Brassica oleracea
BraA09t36179Z Brassica rapa
C09p05890 Brassica napus
CAN.G1459.10 Capsicum annuum
CANSAT54G1062 Cannabis sativa
CARHR186230 Cardamine hirsuta
Carub.0006s2486 Capsella rubella
Ca_05800_v3 Cicer arietinum L.
CBR_g19246 Chara braunii
Cc02_g34120 Coffea canephora
Cfa006628 Carpinus fangiana
Ciclev10001711m.g Citrus clementina
CiPaw.08G161900 Carya illinoinensis
ClCG03G017120 Citrullus lanatus
COL.COLO4_10518 Corchorus olitorius
Cpa.g.sc48.95 Carica papaya
Cre09.g392700 Chlamydomonas reinhardtii
CsaV3_1G038840 Cucumis sativus L.
CSS0003718 Camellia sinensis var. sinensis
DCAR_029393 Daucus carota
Dinv30810 Davidia involucrata
Duzib177G0190 Durio zibethinus
ECA236G2290 Erigeron canadensis
EL10Ac4g09916 Beta vulgaris
Eucgr.B01914 Eucalyptus grandis
FAN02G3513 Fragaria x ananassa
FAN05G5419 Fragaria x ananassa
FAN14G3705 Fragaria x ananassa
FvH4_6g06560 Fragaria vesca
Glyma.03G235700 Glycine max
Glyma.19G233500 Glycine max
Gohir.A13G109200 Gossypium hirsutum
Gohir.D13G112000 Gossypium hirsutum
Gorai.013G125700 Gossypium raimondii
GSVIVG01031144001 Vitis vinifera
HanXRQChr11g0339311 Helianthus annuus
Haze_04140 Corylus avellana
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla
HPP92_011843 Vanilla planifolia
Hund07096 Selenicereus undatus
Hund07097 Selenicereus undatus
Lalb_Chr18g0045761 Lupinus albus
Lj1g0022852 Lotus japonicus
Lj2g0012465 Lotus japonicus
Lj9C146T2 Lonicera japonica
Lsat_1_v5_gn_5_186620 Lactuca sativa
Lsat_1_v5_gn_9_88181 Lactuca sativa
Manes.08G117600 Manihot esculenta
Mapoly0054s0047 Marchantia polymorpha
MBI18_g46420_MAGBIO Magnolia biondii
MCO11G180 Micromonas commoda
MD04G1200800 Malus domestica
Medtr7g112650 Medicago truncatula
MELO3C015308.2 Cucumis melo
Migut.N01744 Erythranthe guttata
MSTRG.16393 Avicennia marina
Nitab4.5_0003658g0090 Nicotiana tabacum
Nitab4.5_0003844g0020 Nicotiana tabacum
Nn4g25830 Nelumbo nucifera
Oeu043348.1 Olea europaea
Oeu043349.1 Olea europaea
Os07g0673000 Oryza sativa ssp. japonica
Peaxi162Scf00037g01125 Petunia axillaris
PGR083G2713 Punica granatum
PGSC0003DMG400007542 Solanum tuberosum
PGSC0003DMG400024710 Solanum tuberosum
Phvul.006G089700 Phaseolus vulgaris
Potri.013G017100 Populus trichocarpa
Pp3c6_26830 Physcomitrium patens
Prupe.6G320900 Prunus persica
Psat0s27g0120 Pisum sativum
PSO210G1514 Papaver somniferum
PSO210G1688 Papaver somniferum
PSO421G0497 Papaver somniferum
QL03p020986 Quercus lobata
QL03p021882 Quercus lobata
RcHm_v2.0_Chr3g0455711 Rosa chinensis
Rhsim07G0188300 Rhododendron simsii
Sabra13G0015900 Salix brachista
Sabra13G0020100 Salix brachista
SalBow7G2778 Salvia bowleyana
Sc16g0008820 Simmondsia chinensis
Sed0006495 Sechium edule
SEGI_05797 Sequoiadendron giganteum
SGA_v2.0_scaffold172G38986 Striga asiatica
SMO172G0153 Selaginella moellendorffii
SMO172G0225 Selaginella moellendorffii
SMO172G0232 Selaginella moellendorffii
SMO198G0100 Selaginella moellendorffii
Solyc01g099700.3 Solanum lycopersicum
Sopen01g043220 Solanum pennellii
Sp2g20880 Schrenkiella parvula
TAR278G0003 Trochodendron aralioides
TAR633G0157 Trochodendron aralioides
THA.LOC104818716 Tarenaya hassleriana
Thecc.05G312900 Theobroma cacao
Thhalv10005730m.g Eutrema salsugineum
TPR.G33225 Trifolium pratense
TWI12G0288 Tripterygium wilfordii
TWI36G0652 Tripterygium wilfordii
unitig_52.g17112 Utricularia gibba
vmacro04816 Vaccinium macrocarpon
VMungo0540G0116 Vigna mungo
Zm00001eb111280 Zea mays

User provided reference genes

Program Settings