Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05930 Brassica napus
A03p09720 Brassica napus
Actinidia07445 Actinidia chinensis
Actinidia07446 Actinidia chinensis
Actinidia09391 Actinidia chinensis
Actinidia20315 Actinidia chinensis
AL6G31490 Arabidopsis lyrata
Aqoxy7G01949 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1782J0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7UYF7 Arachis hypogaea
AT5G19960 Arabidopsis thaliana
ATR0083G066 Amborella trichopoda
Atru.chr7.1266 Acer truncatum
AUR62011052 Chenopodium quinoa
AUR62033428 Chenopodium quinoa
BcaB01g04821 Brassica carinata
BcaC03g17033 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01930 Brassica napus
BolC2t06997H Brassica oleracea
BolC3t13600H Brassica oleracea
BraA02t05545Z Brassica rapa
BraA03t10288Z Brassica rapa
C03p11300 Brassica napus
CANSAT56G0349 Cannabis sativa
CARHR056430 Cardamine hirsuta
CARHR056440 Cardamine hirsuta
CARHR192890 Cardamine hirsuta
CARHR217080 Cardamine hirsuta
CARHR225200 Cardamine hirsuta
Carub.0006s1833 Capsella rubella
Ca_21716_v3 Cicer arietinum L.
Cc06_g09130 Coffea canephora
CDE01G0658 Ceratophyllum demersum
CDE02G1919 Ceratophyllum demersum
Cfa012812 Carpinus fangiana
Ciclev10008764m.g Citrus clementina
CiPaw.03G237400 Carya illinoinensis
ClCG11G002710 Citrullus lanatus
COL.COLO4_34973 Corchorus olitorius
Cpa.g.sc75.91 Carica papaya
CsaV3_2G002560 Cucumis sativus L.
CSS0000400 Camellia sinensis var. sinensis
CSS0009020 Camellia sinensis var. sinensis
DCAR_017855 Daucus carota
Dinv36586 Davidia involucrata
Dinv36587 Davidia involucrata
Dinv41556 Davidia involucrata
Duzib150G0454 Durio zibethinus
Duzib168G0125 Durio zibethinus
ECA240G0175 Erigeron canadensis
EL10Ac8g18573 Beta vulgaris
Eucgr.C01102 Eucalyptus grandis
Eucgr.L02381 Eucalyptus grandis
FAN02G1783 Fragaria x ananassa
FAN03G3504 Fragaria x ananassa
FAN19G2606 Fragaria x ananassa
FAN21G2984 Fragaria x ananassa
FAN23G2044 Fragaria x ananassa
FAN26G0760 Fragaria x ananassa
FAN26G2763 Fragaria x ananassa
FAN28G1406 Fragaria x ananassa
FvH4_1g04100 Fragaria vesca
FvH4_1g04120 Fragaria vesca
Glyma.05G011400 Glycine max
Glyma.17G119500 Glycine max
Gohir.A05G020600 Gossypium hirsutum
Gohir.D05G021700 Gossypium hirsutum
Gorai.009G022000 Gossypium raimondii
GSVIVG01015463001 Vitis vinifera
HanXRQChr03g0062171 Helianthus annuus
Haze_25659 Corylus avellana
Hma1.2p1_0018F.1_g012980 Hydrangea macrophylla
HPP92_008701 Vanilla planifolia
Hund09164 Selenicereus undatus
Lalb_Chr23g0275181 Lupinus albus
Lj4g0015100 Lotus japonicus
Lj7A637G71 Lonicera japonica
Lj7C637T6 Lonicera japonica
Lsat_1_v5_gn_7_42660 Lactuca sativa
Manes.14G127600 Manihot esculenta
MBI04_g43150_MAGBIO Magnolia biondii
MBI04_g46125_MAGBIO Magnolia biondii
MD02G1039700 Malus domestica
MD15G1180600 Malus domestica
Medtr4g113150 Medicago truncatula
MELO3C004534.2 Cucumis melo
MELO3C030806.2 Cucumis melo
Migut.K00484 Erythranthe guttata
MSTRG.10623 Avicennia marina
Nitab4.5_0000432g0020 Nicotiana tabacum
Nitab4.5_0001719g0050 Nicotiana tabacum
Nn2g11875 Nelumbo nucifera
Nn8g39326 Nelumbo nucifera
Oeu007503.1 Olea europaea
Os02g0208200 Oryza sativa ssp. japonica
Peaxi162Scf00361g00115 Petunia axillaris
PGR142G3933 Punica granatum
Phvul.003G159900 Phaseolus vulgaris
Potri.018G074100 Populus trichocarpa
Prupe.7G236000 Prunus persica
Psat4g042200 Pisum sativum
PSO170G5697 Papaver somniferum
QL02p086599 Quercus lobata
RcHm_v2.0_Chr2g0089591 Rosa chinensis
Rhsim01G0089400 Rhododendron simsii
Sabra18G0062700 Salix brachista
Sc08g0006960 Simmondsia chinensis
Sed0007503 Sechium edule
SEGI_03053 Sequoiadendron giganteum
SEGI_26165 Sequoiadendron giganteum
SGA_v2.0_scaffold17G08036 Striga asiatica
Sp6g24420 Schrenkiella parvula
TAR636G3075 Trochodendron aralioides
THA.LOC104815108 Tarenaya hassleriana
Thecc.09G118300 Theobroma cacao
Thhalv10014075m.g Eutrema salsugineum
TPR.G26771 Trifolium pratense
TWI32G1134 Tripterygium wilfordii
vmacro20684 Vaccinium macrocarpon
vmacro23165 Vaccinium macrocarpon
vmacro23455 Vaccinium macrocarpon
VMungo1215G0522 Vigna mungo
Zm00001eb205490 Zea mays
Zm00001eb240430 Zea mays

User provided reference genes

Program Settings