Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p20400 Brassica napus
A07p41620 Brassica napus
Aa31LG4G6170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis
Actinidia29765 Actinidia chinensis
AL2G36080 Arabidopsis lyrata
Aqoxy6G00455 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea
AT1G76060 Arabidopsis thaliana
ATR0580G246 Amborella trichopoda
ATR0680G026 Amborella trichopoda
Atru.chr13.220 Acer truncatum
AUR62016156 Chenopodium quinoa
AUR62036301 Chenopodium quinoa
BcaC03g15641 Brassica carinata
BcaC08g47098 Brassica carinata
BcaC08g47099 Brassica carinata
BcaC08g47102 Brassica carinata
BcaC08g47297 Brassica carinata
BolC2t09355H Brassica oleracea
BolC6t40039H Brassica oleracea
BraA02t07072Z Brassica rapa
BraA07t31691Z Brassica rapa
C02p33500 Brassica napus
C06p50000 Brassica napus
CAN.G311.71 Capsicum annuum
CANSAT25G3089 Cannabis sativa
CARHR069600 Cardamine hirsuta
Carub.0002s2294 Capsella rubella
Ca_13483_v3 Cicer arietinum L.
CBR_g51533 Chara braunii
Cc10_g01150 Coffea canephora
Cfa014004 Carpinus fangiana
Ciclev10002722m.g Citrus clementina
CiPaw.08G069100 Carya illinoinensis
ClCG08G014030 Citrullus lanatus
COL.COLO4_26087 Corchorus olitorius
Cpa.g.sc81.101 Carica papaya
Cre01.g028150 Chlamydomonas reinhardtii
CsaV3_2G024420 Cucumis sativus L.
CSS0047659 Camellia sinensis var. sinensis
DCAR_007723 Daucus carota
Dinv18455 Davidia involucrata
Duzib093G1673 Durio zibethinus
ECA238G1428 Erigeron canadensis
EL10Ac1g02084 Beta vulgaris
Eucgr.F01697 Eucalyptus grandis
Eucgr.F01698 Eucalyptus grandis
FAN20G3208 Fragaria x ananassa
FAN27G3062 Fragaria x ananassa
FvH4_2g37980 Fragaria vesca
Glyma.09G042800 Glycine max
Glyma.14G222200 Glycine max
Glyma.17G261100 Glycine max
Gohir.A06G001000 Gossypium hirsutum
Gohir.A09G028000 Gossypium hirsutum
Gohir.D09G027401 Gossypium hirsutum
Gorai.006G031900 Gossypium raimondii
Gorai.010G001200 Gossypium raimondii
HanXRQChr14g0429471 Helianthus annuus
Haze_22699 Corylus avellana
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla
HPP92_013449 Vanilla planifolia
Lalb_Chr23g0266011 Lupinus albus
Lj4C17T8 Lonicera japonica
Lj5g0026723 Lotus japonicus
Lsat_1_v5_gn_2_6761 Lactuca sativa
Manes.05G142900 Manihot esculenta
Mapoly0186s0006 Marchantia polymorpha
MBI03_g11314_MAGBIO Magnolia biondii
MCO02G370 Micromonas commoda
MD08G1008000 Malus domestica
MD15G1006900 Malus domestica
Medtr1g026078 Medicago truncatula
MELO3C011341.2 Cucumis melo
Migut.C00897 Erythranthe guttata
MSTRG.1145 Avicennia marina
Nitab4.5_0003030g0100 Nicotiana tabacum
Nn6g34597 Nelumbo nucifera
Os03g0136600 Oryza sativa ssp. japonica
Peaxi162Scf00174g00075 Petunia axillaris
PGR142G1353 Punica granatum
PGSC0003DMG400009954 Solanum tuberosum
PGSC0003DMG400012651 Solanum tuberosum
Phvul.001G003000 Phaseolus vulgaris
Potri.002G016600 Populus trichocarpa
Pp3c14_25160 Physcomitrium patens
PRCOL_00001167 Prasinoderma coloniale
Prupe.1G359800 Prunus persica
Psat6g001160 Pisum sativum
PSO541G5119 Papaver somniferum
PSO675G2459 Papaver somniferum
QL02p012927 Quercus lobata
QL08p014343 Quercus lobata
RcHm_v2.0_Chr6g0303641 Rosa chinensis
Rhsim07G0248600 Rhododendron simsii
Sabra02G0013300 Salix brachista
SalBow6G2408 Salvia bowleyana
SalBow7G2419 Salvia bowleyana
Sc02g0008830 Simmondsia chinensis
Sc02g0008870 Simmondsia chinensis
Sed0012705 Sechium edule
Sed0017306 Sechium edule
Sed0026898 Sechium edule
SEGI_22650 Sequoiadendron giganteum
SEGI_35230 Sequoiadendron giganteum
SGA_v2.0_scaffold292G47394 Striga asiatica
SHI08020 Sapria himalayana
SMO358G0213 Selaginella moellendorffii
Solyc02g085937.1 Solanum lycopersicum
Solyc04g081940.3 Solanum lycopersicum
Sopen02g030620 Solanum pennellii
Sopen04g035580 Solanum pennellii
Sp5g31180 Schrenkiella parvula
TAR628G1405 Trochodendron aralioides
THA.LOC104811442 Tarenaya hassleriana
Thecc.08G051300 Theobroma cacao
Thhalv10019271m.g Eutrema salsugineum
TPR.G26406 Trifolium pratense
TWI14G1330 Tripterygium wilfordii
unitig_32.g11245 Utricularia gibba
VMungo0647G0728 Vigna mungo
Zm00001eb002920 Zea mays

User provided reference genes

Program Settings