Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p45130 Brassica napus
Aa31csc39G30 Aethionema arabicum
Actinidia14396 Actinidia chinensis
Ah.01g005640 Amaranthus hybridus
AL8G10680 Arabidopsis lyrata
Aqoxy3G01604 Aquilegia oxysepala
Aqoxy6G02102 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.S7MQ4D Arachis hypogaea
AT5G47360 Arabidopsis thaliana
ATR0697G201 Amborella trichopoda
ATR0787G037 Amborella trichopoda
Atru.chr9.1257 Acer truncatum
AUR62018329 Chenopodium quinoa
AUR62035870 Chenopodium quinoa
BcaC06g31395 Brassica carinata
BcaC06g31398 Brassica carinata
BcaC06g34259 Brassica carinata
BolC7t43646H Brassica oleracea
BraA06t27383Z Brassica rapa
C07p31010 Brassica napus
CAN.G1312.18 Capsicum annuum
CANSAT25G0610 Cannabis sativa
CARHR174040 Cardamine hirsuta
Carub.0008s0042 Capsella rubella
Ca_22891_v3 Cicer arietinum L.
Cc08_g12000 Coffea canephora
CDE05G0339 Ceratophyllum demersum
Ciclev10019985m.g Citrus clementina
CiPaw.16G085600 Carya illinoinensis
ClCG06G010030 Citrullus lanatus
COL.COLO4_37104 Corchorus olitorius
Cpa.g.sc89.62 Carica papaya
CsaV3_2G011310 Cucumis sativus L.
CSS0025678 Camellia sinensis var. sinensis
DCAR_009350 Daucus carota
DCAR_028626 Daucus carota
Dinv25846 Davidia involucrata
Duzib068G0402 Durio zibethinus
ECA236G1262 Erigeron canadensis
EL10Ac5g12550 Beta vulgaris
Eucgr.E00397 Eucalyptus grandis
FAN04G1593 Fragaria x ananassa
FAN08G3355 Fragaria x ananassa
FAN13G1818 Fragaria x ananassa
FAN18G2780 Fragaria x ananassa
FvH4_5g19630 Fragaria vesca
Glyma.08G238900 Glycine max
Glyma.15G265000 Glycine max
Gohir.A02G148300 Gossypium hirsutum
Gohir.A03G125450 Gossypium hirsutum
Gohir.A11G027600 Gossypium hirsutum
Gohir.D02G148280 Gossypium hirsutum
Gohir.D03G032200 Gossypium hirsutum
Gohir.D11G026800 Gossypium hirsutum
Gorai.003G033700 Gossypium raimondii
Gorai.005G166300 Gossypium raimondii
Gorai.007G029300 Gossypium raimondii
GSVIVG01007151001 Vitis vinifera
HanXRQChr17g0533241 Helianthus annuus
Haze_02836 Corylus avellana
Hma1.2p1_1196F.1_g266040 Hydrangea macrophylla
Hma1.2p1_1196F.1_g266060 Hydrangea macrophylla
Hund12818 Selenicereus undatus
Lalb_Chr09g0323451 Lupinus albus
Lj3C13G5 Lonicera japonica
Lj3g0022967 Lotus japonicus
Lsat_1_v5_gn_4_109201 Lactuca sativa
Lsat_1_v5_gn_4_109281 Lactuca sativa
Manes.02G042000 Manihot esculenta
Manes.14G149022 Manihot esculenta
MD04G1061400 Malus domestica
MD06G1055200 Malus domestica
Medtr4g021220 Medicago truncatula
MELO3C008512.2 Cucumis melo
Migut.N02973 Erythranthe guttata
MSTRG.24505 Avicennia marina
Nitab4.5_0001438g0060 Nicotiana tabacum
Nitab4.5_0002601g0010 Nicotiana tabacum
Nitab4.5_0007283g0050 Nicotiana tabacum
Nitab4.5_0010304g0010 Nicotiana tabacum
Nn4g24039 Nelumbo nucifera
Oeu052953.1 Olea europaea
Os03g0225300 Oryza sativa ssp. japonica
Peaxi162Scf00017g03140 Petunia axillaris
Peaxi162Scf00242g00094 Petunia axillaris
Peaxi162Scf00346g00056 Petunia axillaris
PGR042G3373 Punica granatum
PGR042G3592 Punica granatum
PGSC0003DMG400039297 Solanum tuberosum
Phvul.011G001300 Phaseolus vulgaris
Potri.001G154901 Populus trichocarpa
Prupe.4G276000 Prunus persica
Psat7g239440 Pisum sativum
PSO541G3795 Papaver somniferum
PSO675G7384 Papaver somniferum
QL01p026672 Quercus lobata
QL09p046276 Quercus lobata
RcHm_v2.0_Chr7g0204361 Rosa chinensis
Rhsim13G0212900 Rhododendron simsii
Sabra01G0124300 Salix brachista
Sabra01G0124400 Salix brachista
Sabra01G0124500 Salix brachista
SalBow1G4333 Salvia bowleyana
Sc01g0008230 Simmondsia chinensis
Sed0010566 Sechium edule
SEGI_21761 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19637 Striga asiatica
SHI09587 Sapria himalayana
Solyc08g078280.1 Solanum lycopersicum
Sopen08g026780 Solanum pennellii
Sp2g12080 Schrenkiella parvula
TAR628G0558 Trochodendron aralioides
TAR628G0792 Trochodendron aralioides
THA.LOC104810088 Tarenaya hassleriana
Thecc.03G246700 Theobroma cacao
Thhalv10000870m.g Eutrema salsugineum
TPR.G39692 Trifolium pratense
TPR.G5570 Trifolium pratense
TWI15G0916 Tripterygium wilfordii
vmacro00015 Vaccinium macrocarpon
VMungo0251G3116 Vigna mungo
VMungo1127G0679 Vigna mungo
VMungo1215G1828 Vigna mungo
Zm00001eb009290 Zea mays

User provided reference genes

Program Settings