Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p40180 Brassica napus
Aa31LG7G8360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis
Actinidia17748 Actinidia chinensis
Actinidia31971 Actinidia chinensis
Ah.02g129470 Amaranthus hybridus
AL1G38940 Arabidopsis lyrata
Aqoxy3G00634 Aquilegia oxysepala
AT1G26761 Arabidopsis thaliana
ATR0564G327 Amborella trichopoda
Atru.chr11.1740 Acer truncatum
Atru.chr11.1742 Acer truncatum
AUR62005827 Chenopodium quinoa
AUR62032821 Chenopodium quinoa
BcaC05g26389 Brassica carinata
BolC5t31156H Brassica oleracea
BraA09t39516Z Brassica rapa
C05p24200 Brassica napus
CAN.G1335.8 Capsicum annuum
CANSAT64G0537 Cannabis sativa
CARHR025180 Cardamine hirsuta
Carub.0001s2425 Capsella rubella
Ca_04827_v3 Cicer arietinum L.
Cc00_g16610 Coffea canephora
CDE02G1760 Ceratophyllum demersum
CDE06G2322 Ceratophyllum demersum
Cfa008944 Carpinus fangiana
Cfa008945 Carpinus fangiana
Ciclev10032022m.g Citrus clementina
CiPaw.05G130700 Carya illinoinensis
CiPaw.05G130800 Carya illinoinensis
CiPaw.06G087600 Carya illinoinensis
COL.COLO4_27992 Corchorus olitorius
Cpa.g.sc1.57 Carica papaya
Cre06.g273050 Chlamydomonas reinhardtii
CSS0033869 Camellia sinensis var. sinensis
CSS0044828 Camellia sinensis var. sinensis
DCAR_007171 Daucus carota
Dinv07949 Davidia involucrata
Dinv34129 Davidia involucrata
Dinv34130 Davidia involucrata
Duzib248G1019 Durio zibethinus
ECA246G3166 Erigeron canadensis
EL10Ac6g13248 Beta vulgaris
Eucgr.B03205 Eucalyptus grandis
Eucgr.G02484 Eucalyptus grandis
FAN07G1460 Fragaria x ananassa
FAN07G2088 Fragaria x ananassa
FAN12G0639 Fragaria x ananassa
FAN12G2051 Fragaria x ananassa
FAN22G0994 Fragaria x ananassa
FAN22G2397 Fragaria x ananassa
FvH4_4g30980 Fragaria vesca
FvH4_4g30990 Fragaria vesca
Glyma.01G052300 Glycine max
Glyma.02G110300 Glycine max
Gohir.D13G077400 Gossypium hirsutum
Gorai.013G088500 Gossypium raimondii
GSVIVG01005153001 Vitis vinifera
GSVIVG01005154001 Vitis vinifera
HanXRQChr15g0476901 Helianthus annuus
Haze_11970 Corylus avellana
Haze_11971 Corylus avellana
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla
Lalb_Chr04g0255911 Lupinus albus
Lj2g0004295 Lotus japonicus
Lj3C1034G10 Lonicera japonica
Lj7C251T2 Lonicera japonica
Lj7P254T18 Lonicera japonica
Lsat_1_v5_gn_3_51980 Lactuca sativa
Manes.01G033900 Manihot esculenta
Manes.05G105200 Manihot esculenta
MBI05_g36409_MAGBIO Magnolia biondii
MD16G1068900 Malus domestica
Medtr5g042100 Medicago truncatula
Migut.L01261 Erythranthe guttata
MSTRG.719 Avicennia marina
Nitab4.5_0000145g0020 Nicotiana tabacum
Nitab4.5_0004661g0030 Nicotiana tabacum
Nn3g17286 Nelumbo nucifera
Nn3g17302 Nelumbo nucifera
Oeu005762.1 Olea europaea
Os08g0433300 Oryza sativa ssp. japonica
Peaxi162Scf00222g00816 Petunia axillaris
PGR102G0590 Punica granatum
PGR102G2002 Punica granatum
PGSC0003DMG400018440 Solanum tuberosum
Phvul.003G046500 Phaseolus vulgaris
Potri.008G089800 Populus trichocarpa
Pp3c11_9510 Physcomitrium patens
Pp3c2_5840 Physcomitrium patens
Pp3c5_14870 Physcomitrium patens
Pp3c9_20180 Physcomitrium patens
PRCOL_00004009 Prasinoderma coloniale
Prupe.1G278300 Prunus persica
Psat2g116280 Pisum sativum
PSO210G1214 Papaver somniferum
QL03p069077 Quercus lobata
QL12p039232 Quercus lobata
QL12p039367 Quercus lobata
QL93p1999_0143 Quercus lobata
RcHm_v2.0_Chr4g0439341 Rosa chinensis
RcHm_v2.0_Chr4g0439361 Rosa chinensis
Rhsim12G0079500 Rhododendron simsii
Sabra08G0067200 Salix brachista
SalBow2G2517 Salvia bowleyana
SEGI_07124 Sequoiadendron giganteum
SEGI_31378 Sequoiadendron giganteum
SEGI_38638 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31082 Striga asiatica
SGA_v2.0_scaffold157G37365 Striga asiatica
Solyc05g007680.1 Solanum lycopersicum
Sopen05g003560 Solanum pennellii
Sp1g22040 Schrenkiella parvula
TAR622G1196 Trochodendron aralioides
THA.LOC104808694 Tarenaya hassleriana
Thecc.02G341500 Theobroma cacao
Thhalv10007591m.g Eutrema salsugineum
TPR.G34705 Trifolium pratense
TWI75G1459 Tripterygium wilfordii
unitig_699.g19915 Utricularia gibba
VMungo1215G0113 Vigna mungo
Zm00001eb041520 Zea mays

User provided reference genes

Program Settings