Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23410 Brassica napus
A03p48310 Brassica napus
Actinidia28761 Actinidia chinensis
Ah.02g115220 Amaranthus hybridus
AL5G31940 Arabidopsis lyrata
Aqoxy5G00947 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea
AT3G51500 Arabidopsis thaliana
ATR0605G223 Amborella trichopoda
Atru.chr3.146 Acer truncatum
Atru.chr3.7 Acer truncatum
AUR62036260 Chenopodium quinoa
AUR62039711 Chenopodium quinoa
BcaC06g33030 Brassica carinata
BcaNung00381 Brassica carinata
BolC1t02836H Brassica oleracea
BolC7t45152H Brassica oleracea
BraA01t02248Z Brassica rapa
BraA03t13939Z Brassica rapa
C01p29040 Brassica napus
C07p46340 Brassica napus
CAN.G883.23 Capsicum annuum
CANSAT56G1034 Cannabis sativa
CARHR161080 Cardamine hirsuta
Carub.0005s1788 Capsella rubella
Ca_25041_v3 Cicer arietinum L.
CDE04G3216 Ceratophyllum demersum
CDE06G2001 Ceratophyllum demersum
Cfa000559 Carpinus fangiana
Cfa007121 Carpinus fangiana
Cfa011161 Carpinus fangiana
Cfa012756 Carpinus fangiana
Ciclev10026700m.g Citrus clementina
CiPaw.03G212200 Carya illinoinensis
COL.COLO4_15698 Corchorus olitorius
Cpa.g.sc178.36 Carica papaya
CsaV3_6G047960 Cucumis sativus L.
CSS0002146 Camellia sinensis var. sinensis
CSS0046434 Camellia sinensis var. sinensis
DCAR_014127 Daucus carota
Dinv19113 Davidia involucrata
Dinv24399 Davidia involucrata
Dinv28289 Davidia involucrata
Duzib133G0235 Durio zibethinus
ECA238G1438 Erigeron canadensis
EL10Ac5g11754 Beta vulgaris
Eucgr.J02575 Eucalyptus grandis
FAN19G1193 Fragaria x ananassa
FAN23G0152 Fragaria x ananassa
FAN23G1843 Fragaria x ananassa
FAN26G0304 Fragaria x ananassa
FAN28G0584 Fragaria x ananassa
FvH4_1g09810 Fragaria vesca
Glyma.01G155800 Glycine max
Glyma.07G079100 Glycine max
Glyma.11G089000 Glycine max
Gohir.A07G076575 Gossypium hirsutum
Gohir.A11G167300 Gossypium hirsutum
Gohir.D07G081300 Gossypium hirsutum
Gohir.D11G173600 Gossypium hirsutum
Gorai.001G086400 Gossypium raimondii
Gorai.007G185900 Gossypium raimondii
HanXRQChr10g0316121 Helianthus annuus
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla
HPP92_018846 Vanilla planifolia
HPP92_018898 Vanilla planifolia
Lalb_Chr05g0215011 Lupinus albus
Lalb_Chr16g0380261 Lupinus albus
Lj2g0016631 Lotus japonicus
Lj4P245T44 Lonicera japonica
Lsat_1_v5_gn_2_72860 Lactuca sativa
Manes.01G158600 Manihot esculenta
Manes.02G117704 Manihot esculenta
MBI04_g11522_MAGBIO Magnolia biondii
MD02G1107400 Malus domestica
MD15G1226600 Malus domestica
Medtr5g025015 Medicago truncatula
MELO3C007985.2 Cucumis melo
Migut.J00328 Erythranthe guttata
MSTRG.19082 Avicennia marina
Nitab4.5_0011544g0020 Nicotiana tabacum
Nitab4.5_0012518g0010 Nicotiana tabacum
Nn6g31587 Nelumbo nucifera
Oeu000786.1 Olea europaea
Oeu024785.2 Olea europaea
Os02g0193500 Oryza sativa ssp. japonica
Peaxi162Scf00981g00021 Petunia axillaris
PGR042G1229 Punica granatum
PGR119G1180 Punica granatum
PGSC0003DMG400009426 Solanum tuberosum
Phvul.002G119800 Phaseolus vulgaris
Potri.011G146400 Populus trichocarpa
Prupe.7G188600 Prunus persica
Psat2g147080 Pisum sativum
PSO017G0885 Papaver somniferum
PSO017G7180 Papaver somniferum
QL06p053503 Quercus lobata
RcHm_v2.0_Chr2g0096641 Rosa chinensis
Rhsim10G0190200 Rhododendron simsii
Sabra11G0131300 Salix brachista
Sabra16G0308300 Salix brachista
SalBow3G3387 Salvia bowleyana
Sc03g0004180 Simmondsia chinensis
Sed0010545 Sechium edule
Sed0016714 Sechium edule
SEGI_02084 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33784 Striga asiatica
SHI11157 Sapria himalayana
Solyc02g068290.2 Solanum lycopersicum
Sopen02g017390 Solanum pennellii
Sp5g10740 Schrenkiella parvula
TAR376G1029 Trochodendron aralioides
TAR381G1497 Trochodendron aralioides
TAR628G0945 Trochodendron aralioides
THA.LOC109117268 Tarenaya hassleriana
Thecc.04G122700 Theobroma cacao
Thhalv10010838m.g Eutrema salsugineum
TPR.G33762 Trifolium pratense
TWI53G1768 Tripterygium wilfordii
unitig_8.g4055 Utricularia gibba
vmacro20410 Vaccinium macrocarpon
VMungo1215G0575 Vigna mungo
Zm00001eb236520 Zea mays

User provided reference genes

Program Settings