Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p02700 Brassica napus
Aa31LG8G15150 Aethionema arabicum
Actinidia14030 Actinidia chinensis
Actinidia22984 Actinidia chinensis
Actinidia28701 Actinidia chinensis
Actinidia31001 Actinidia chinensis
AL3G51010 Arabidopsis lyrata
Aqoxy2G01815 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SHNU8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VDMC0V Arachis hypogaea
AT2G17975 Arabidopsis thaliana
ATR0421G001 Amborella trichopoda
ATR0421G002 Amborella trichopoda
ATR0853G001 Amborella trichopoda
BcaB03g16582 Brassica carinata
BcaC06g36350 Brassica carinata
BolC7t40901H Brassica oleracea
BraA07t28070Z Brassica rapa
C07p05000 Brassica napus
CAN.G1735.1 Capsicum annuum
CANSAT01G2157 Cannabis sativa
CARHR108450 Cardamine hirsuta
Carub.0003s3211 Capsella rubella
Ca_22372_v3 Cicer arietinum L.
CBR_g22407 Chara braunii
CBR_g82288 Chara braunii
Cc07_g10630 Coffea canephora
CDE02G2139 Ceratophyllum demersum
CDE04G0153 Ceratophyllum demersum
Ciclev10025906m.g Citrus clementina
CiPaw.07G057900 Carya illinoinensis
ClCG01G020230 Citrullus lanatus
COL.COLO4_21919 Corchorus olitorius
Cpa.g.sc6.241 Carica papaya
CsaV3_6G047020 Cucumis sativus L.
CSS0034598 Camellia sinensis var. sinensis
CSS0039773 Camellia sinensis var. sinensis
DCAR_032392 Daucus carota
Dinv33624 Davidia involucrata
Duzib264G0144 Durio zibethinus
ECA238G0838 Erigeron canadensis
EL10As8g23834 Beta vulgaris
Eucgr.J02427 Eucalyptus grandis
FAN19G0259 Fragaria x ananassa
FAN23G1778 Fragaria x ananassa
FAN26G2471 Fragaria x ananassa
FAN28G2242 Fragaria x ananassa
FvH4_1g11930 Fragaria vesca
Glyma.02G048900 Glycine max
Glyma.16G129000 Glycine max
Gohir.A10G098200 Gossypium hirsutum
Gohir.A11G175800 Gossypium hirsutum
Gohir.D10G090000 Gossypium hirsutum
Gohir.D11G183600 Gossypium hirsutum
Gorai.007G195500 Gossypium raimondii
Gorai.011G098800 Gossypium raimondii
GSVIVG01018789001 Vitis vinifera
HanXRQChr01g0002841 Helianthus annuus
HanXRQChr14g0441351 Helianthus annuus
Haze_03772 Corylus avellana
Hma1.2p1_0589F.1_g184775 Hydrangea macrophylla
Hma1.2p1_0743F.1_g211600 Hydrangea macrophylla
HPP92_007113 Vanilla planifolia
Hund16487 Selenicereus undatus
Lalb_Chr09g0333101 Lupinus albus
Lj2C467T3 Lonicera japonica
Lj4g0024758 Lotus japonicus
Lsat_1_v5_gn_4_146641 Lactuca sativa
Manes.01G145300 Manihot esculenta
MBI05_g15342_MAGBIO Magnolia biondii
MD02G1133300 Malus domestica
MD15G1246300 Malus domestica
Medtr8g075970 Medicago truncatula
MELO3C007895.2 Cucumis melo
Migut.H01156 Erythranthe guttata
MSTRG.2708 Avicennia marina
Nitab4.5_0000438g0030 Nicotiana tabacum
Nitab4.5_0006119g0030 Nicotiana tabacum
Nn6g32361 Nelumbo nucifera
Oeu048467.1 Olea europaea
Os04g0110600 Oryza sativa ssp. japonica
Peaxi162Scf00034g02720 Petunia axillaris
PGR102G2413 Punica granatum
PGSC0003DMG400022563 Solanum tuberosum
Phvul.003G262300 Phaseolus vulgaris
Potri.005G115100 Populus trichocarpa
Prupe.7G167400 Prunus persica
Psat4g099000 Pisum sativum
PSO541G5117 Papaver somniferum
PSO675G2528 Papaver somniferum
QL06p032614 Quercus lobata
RcHm_v2.0_Chr2g0099531 Rosa chinensis
Rhsim08G0034100 Rhododendron simsii
Rhsim10G0213000 Rhododendron simsii
Sabra05G0094200 Salix brachista
SalBow3G1310 Salvia bowleyana
Sc16g0002110 Simmondsia chinensis
Sed0000291 Sechium edule
SGA_v2.0_scaffold137G35082 Striga asiatica
SMO347G0374 Selaginella moellendorffii
Solyc03g033560.3 Solanum lycopersicum
Solyc04g025995.1 Solanum lycopersicum
Solyc10g038030.3 Solanum lycopersicum
Solyc10g038040.1 Solanum lycopersicum
Solyc10g038150.2 Solanum lycopersicum
Sopen03g006350 Solanum pennellii
Sopen04g013620 Solanum pennellii
Sopen04g013660 Solanum pennellii
Sopen10g011120 Solanum pennellii
Sp3g31400 Schrenkiella parvula
TAR133G0002 Trochodendron aralioides
TAR365G0979 Trochodendron aralioides
THA.LOC104804261 Tarenaya hassleriana
Thecc.01G019800 Theobroma cacao
Thhalv10022807m.g Eutrema salsugineum
TPR.G30047 Trifolium pratense
TWI53G2075 Tripterygium wilfordii
unitig_22.g6143 Utricularia gibba
unitig_8.g2966 Utricularia gibba
vmacro21917 Vaccinium macrocarpon
VMungo0251G2040 Vigna mungo
Zm00001eb089410 Zea mays
Zm00001eb411540 Zea mays
Zm00001eb418470 Zea mays

User provided reference genes

Program Settings