Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48320 Brassica napus
Aa31LG9G12590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis
Actinidia16990 Actinidia chinensis
Actinidia21265 Actinidia chinensis
Actinidia27159 Actinidia chinensis
Actinidia35835 Actinidia chinensis
Ah.11g039750 Amaranthus hybridus
AL8G18870 Arabidopsis lyrata
Aqoxy4G01015 Aquilegia oxysepala
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea
AT5G42470 Arabidopsis thaliana
ATR0810G120 Amborella trichopoda
Atru.chr13.285 Acer truncatum
AUR62033899 Chenopodium quinoa
AUR62041903 Chenopodium quinoa
BcaC02g10765 Brassica carinata
BcaC06g31757 Brassica carinata
BolC4t24044H Brassica oleracea
BraA06t27702Z Brassica rapa
C04p25370 Brassica napus
CAN.G311.35 Capsicum annuum
CANSAT25G2040 Cannabis sativa
CARHR181930 Cardamine hirsuta
Carub.0008s0658 Capsella rubella
Ca_00791_v3 Cicer arietinum L.
Ca_07152_v3 Cicer arietinum L.
CBR_g23034 Chara braunii
Cc10_g01620 Coffea canephora
Cc10_g01630 Coffea canephora
CDE04G0374 Ceratophyllum demersum
Cfa013957 Carpinus fangiana
Ciclev10001496m.g Citrus clementina
CiPaw.07G149200 Carya illinoinensis
ClCG05G018230 Citrullus lanatus
COL.COLO4_26140 Corchorus olitorius
Cpa.g.sc26.51 Carica papaya
Cre09.g401367 Chlamydomonas reinhardtii
CsaV3_3G045910 Cucumis sativus L.
CSS0006206 Camellia sinensis var. sinensis
CSS0012189 Camellia sinensis var. sinensis
DCAR_023015 Daucus carota
Dinv31849 Davidia involucrata
Duzib093G0848 Durio zibethinus
Duzib116G0836 Durio zibethinus
ECA233G3412 Erigeron canadensis
EL10Ac1g02188 Beta vulgaris
Eucgr.F01664 Eucalyptus grandis
Eucgr.F02661 Eucalyptus grandis
FAN15G0959 Fragaria x ananassa
FAN20G2474 Fragaria x ananassa
FAN27G1073 Fragaria x ananassa
FvH4_2g38390 Fragaria vesca
Glyma.09G103100 Glycine max
Glyma.15G275100 Glycine max
Gohir.A01G111000 Gossypium hirsutum
Gohir.D01G097700 Gossypium hirsutum
Gorai.002G123300 Gossypium raimondii
GSVIVG01009916001 Vitis vinifera
HanXRQChr13g0387101 Helianthus annuus
Haze_22639 Corylus avellana
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla
HPP92_024091 Vanilla planifolia
Hund05186 Selenicereus undatus
Lalb_Chr20g0119891 Lupinus albus
Lj4C23T1 Lonicera japonica
Lj6g0002207 Lotus japonicus
Lsat_1_v5_gn_8_30701 Lactuca sativa
Manes.05G146900 Manihot esculenta
Mapoly0064s0103 Marchantia polymorpha
MBI05_g07507_MAGBIO Magnolia biondii
MD08G1012700 Malus domestica
MD11G1014100 Malus domestica
MD15G1011700 Malus domestica
Medtr2g029040 Medicago truncatula
MELO3C030484.2 Cucumis melo
Migut.C00843 Erythranthe guttata
MSTRG.1188 Avicennia marina
Nitab4.5_0013390g0010 Nicotiana tabacum
Nn1g05904 Nelumbo nucifera
Oeu014179.1 Olea europaea
Os06g0715600 Oryza sativa ssp. japonica
Peaxi162Scf00438g00835 Petunia axillaris
PGR083G2660 Punica granatum
PGSC0003DMG400009939 Solanum tuberosum
Phvul.005G022200 Phaseolus vulgaris
Potri.002G021700 Populus trichocarpa
Potri.005G240000 Populus trichocarpa
Pp3c4_9730 Physcomitrium patens
Prupe.1G364700 Prunus persica
Psat1g169520 Pisum sativum
PSO541G2958 Papaver somniferum
PSO675G2043 Papaver somniferum
QL02p011683 Quercus lobata
RcHm_v2.0_Chr4g0398161 Rosa chinensis
RcHm_v2.0_Chr4g0398171 Rosa chinensis
RcHm_v2.0_Chr6g0302911 Rosa chinensis
Rhsim06G0021200 Rhododendron simsii
Sabra02G0018100 Salix brachista
Sabra05G0185500 Salix brachista
SalBow7G2189 Salvia bowleyana
Sc02g0008600 Simmondsia chinensis
Sed0018359 Sechium edule
SEGI_16132 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05922 Striga asiatica
SMO196G0156 Selaginella moellendorffii
Solyc04g081500.3 Solanum lycopersicum
Sopen04g035110 Solanum pennellii
Sp7g07860 Schrenkiella parvula
TAR628G0005 Trochodendron aralioides
THA.LOC104809190 Tarenaya hassleriana
Thecc.08G045200 Theobroma cacao
Thhalv10003229m.g Eutrema salsugineum
TPR.G17497 Trifolium pratense
TPR.G29580 Trifolium pratense
TWI36G0533 Tripterygium wilfordii
TWI56G0581 Tripterygium wilfordii
unitig_32.g11136 Utricularia gibba
vmacro07583 Vaccinium macrocarpon
VMungo1080G0965 Vigna mungo
Zm00001eb228060 Zea mays
Zm00001eb340150 Zea mays

User provided reference genes

Program Settings