Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p42930 Brassica napus
Aa31LG5G14980 Aethionema arabicum
Actinidia06783 Actinidia chinensis
Ah.04g163310 Amaranthus hybridus
AL3G14580 Arabidopsis lyrata
Aqoxy5G00275 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea
AT3G04560 Arabidopsis thaliana
ATR0680G180 Amborella trichopoda
Atru.chr2.892 Acer truncatum
AUR62001083 Chenopodium quinoa
AUR62004876 Chenopodium quinoa
AUR62037609 Chenopodium quinoa
BcaB04g19320 Brassica carinata
BcaC02g11594 Brassica carinata
BcaC05g29933 Brassica carinata
BcaC05g30188 Brassica carinata
BolC3t13192H Brassica oleracea
BolC5t34924H Brassica oleracea
BraA05t23038Z Brassica rapa
C03p06830 Brassica napus
C05p62710 Brassica napus
CAN.G582.18 Capsicum annuum
CANSAT54G0018 Cannabis sativa
CARHR078730 Cardamine hirsuta
Carub.0003s0371 Capsella rubella
Ca_10006_v3 Cicer arietinum L.
CBR_g8309 Chara braunii
Cc02_g09040 Coffea canephora
CDE04G1237 Ceratophyllum demersum
CDE06G2524 Ceratophyllum demersum
Cfa006327 Carpinus fangiana
Ciclev10020524m.g Citrus clementina
CiPaw.07G078100 Carya illinoinensis
ClCG06G009350 Citrullus lanatus
COL.COLO4_15424 Corchorus olitorius
Cpa.g.sc162.14 Carica papaya
Cre02.g105450 Chlamydomonas reinhardtii
CsaV3_1G045530 Cucumis sativus L.
CSS0020771 Camellia sinensis var. sinensis
DCAR_028379 Daucus carota
Dinv14621 Davidia involucrata
Duzib177G0389 Durio zibethinus
ECA233G2464 Erigeron canadensis
EL10Ac4g09055 Beta vulgaris
Eucgr.H04256 Eucalyptus grandis
FAN02G0817 Fragaria x ananassa
FAN05G1344 Fragaria x ananassa
FAN05G3173 Fragaria x ananassa
FAN09G3726 Fragaria x ananassa
FAN14G3605 Fragaria x ananassa
FAN14G5548 Fragaria x ananassa
FvH4_6g02310 Fragaria vesca
Glyma.10G167000 Glycine max
Glyma.20G222100 Glycine max
Gohir.A11G251400 Gossypium hirsutum
Gohir.D11G261800 Gossypium hirsutum
Gorai.007G280500 Gossypium raimondii
GSVIVG01036208001 Vitis vinifera
HanXRQChr08g0225371 Helianthus annuus
Haze_04461 Corylus avellana
HPP92_007141 Vanilla planifolia
HPP92_007142 Vanilla planifolia
HPP92_007146 Vanilla planifolia
Hund22148 Selenicereus undatus
Lalb_Chr21g0311261 Lupinus albus
Lj2A39G66 Lonicera japonica
Lj5g0002062 Lotus japonicus
Lsat_1_v5_gn_8_2721 Lactuca sativa
Manes.08G137500 Manihot esculenta
Mapoly0044s0074 Marchantia polymorpha
MBI17_g17506_MAGBIO Magnolia biondii
MCO07G609 Micromonas commoda
MD04G1228300 Malus domestica
MD04G1228400 Malus domestica
MD12G1245500 Malus domestica
Medtr1g079830 Medicago truncatula
MELO3C024661.2 Cucumis melo
Migut.F00812 Erythranthe guttata
Nitab4.5_0000856g0160 Nicotiana tabacum
Nitab4.5_0004928g0020 Nicotiana tabacum
Nn1g02693 Nelumbo nucifera
Oeu034581.1 Olea europaea
Oeu058337.1 Olea europaea
Os02g0820600 Oryza sativa ssp. japonica
Peaxi162Scf00120g00213 Petunia axillaris
PGR004G0019 Punica granatum
PGSC0003DMG400028082 Solanum tuberosum
PGSC0003DMG400028690 Solanum tuberosum
Phvul.L001863 Phaseolus vulgaris
Potri.013G044600 Populus trichocarpa
Pp3c19_8680 Physcomitrium patens
PRCOL_00004538 Prasinoderma coloniale
Prupe.6G348300 Prunus persica
Psat6g143040 Pisum sativum
PSO210G7203 Papaver somniferum
PSO832G3851 Papaver somniferum
QL03p031977 Quercus lobata
QL03p032009 Quercus lobata
RcHm_v2.0_Chr3g0450061 Rosa chinensis
Rhsim05G0175400 Rhododendron simsii
Sabra13G0041000 Salix brachista
SalBow3G3308 Salvia bowleyana
Sc09g0004120 Simmondsia chinensis
Sed0020342 Sechium edule
Sed0023982 Sechium edule
Sed0026137 Sechium edule
SEGI_17356 Sequoiadendron giganteum
SGA_v2.0_scaffold243G44310 Striga asiatica
SHI23187 Sapria himalayana
SHI23188 Sapria himalayana
SMO203G0061 Selaginella moellendorffii
Solyc11g006080.2 Solanum lycopersicum
Sopen11g002020 Solanum pennellii
Sp3g03400 Schrenkiella parvula
THA.LOC104827288 Tarenaya hassleriana
Thecc.05G276300 Theobroma cacao
Thhalv10020805m.g Eutrema salsugineum
TPR.G10279 Trifolium pratense
TWI56G1126 Tripterygium wilfordii
unitig_32.g11831 Utricularia gibba
vmacro20003 Vaccinium macrocarpon
VMungo0720G1212 Vigna mungo
Zm00001eb259140 Zea mays

User provided reference genes

Program Settings