Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09020 Brassica napus
Aa31LG6G15050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis
Actinidia26608 Actinidia chinensis
Ah.03g140070 Amaranthus hybridus
Ah.03g140080 Amaranthus hybridus
AL7G12534 Arabidopsis lyrata
Aqoxy6G01447 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea
AT4G38090 Arabidopsis thaliana
ATR0022G066 Amborella trichopoda
Atru.chr3.1288 Acer truncatum
AUR62003651 Chenopodium quinoa
AUR62017959 Chenopodium quinoa
BcaC02g09451 Brassica carinata
BcaNung03133 Brassica carinata
BolC4t25859H Brassica oleracea
BraA04t16597Z Brassica rapa
C04p42900 Brassica napus
CAN.G1388.12 Capsicum annuum
CANSAT01G3264 Cannabis sativa
CARHR246490 Cardamine hirsuta
Carub.0007s0212 Capsella rubella
Ca_22597_v3 Cicer arietinum L.
Cc07_g14250 Coffea canephora
CDE08G1301 Ceratophyllum demersum
Cfa004350 Carpinus fangiana
Ciclev10026362m.g Citrus clementina
CiPaw.01G046800 Carya illinoinensis
ClCG01G018420 Citrullus lanatus
Cpa.g.sc55.48 Carica papaya
Cre10.g448800 Chlamydomonas reinhardtii
CsaV3_6G045090 Cucumis sativus L.
CSS0019105 Camellia sinensis var. sinensis
Dinv13619 Davidia involucrata
Duzib187G0618 Durio zibethinus
ECA238G0943 Erigeron canadensis
EL10Ac6g15218 Beta vulgaris
Eucgr.H04725 Eucalyptus grandis
FAN19G3199 Fragaria x ananassa
FAN23G2995 Fragaria x ananassa
FAN26G1841 Fragaria x ananassa
FAN28G2490 Fragaria x ananassa
FAN28G2938 Fragaria x ananassa
FvH4_1g19800 Fragaria vesca
FvH4_1g19810 Fragaria vesca
FvH4_1g19820 Fragaria vesca
Glyma.08G280000 Glycine max
Glyma.18G146100 Glycine max
Gohir.A11G050750 Gossypium hirsutum
Gohir.A11G206500 Gossypium hirsutum
Gohir.D11G054100 Gossypium hirsutum
Gohir.D11G217100 Gossypium hirsutum
Gorai.007G059200 Gossypium raimondii
Gorai.007G233200 Gossypium raimondii
GSVIVG01003594001 Vitis vinifera
GSVIVG01006732001 Vitis vinifera
HanXRQChr14g0442661 Helianthus annuus
HanXRQChr16g0520881 Helianthus annuus
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla
HPP92_016734 Vanilla planifolia
HPP92_016750 Vanilla planifolia
Hund16539 Selenicereus undatus
Lalb_Chr05g0228491 Lupinus albus
Lj4A270T42 Lonicera japonica
Lj4g0015074 Lotus japonicus
Lju188A1T76 Lonicera japonica
Lsat_1_v5_gn_2_70881 Lactuca sativa
Manes.12G127300 Manihot esculenta
MBI06_g39563_MAGBIO Magnolia biondii
MCO03G602 Micromonas commoda
MD15G1314800 Malus domestica
Medtr8g068855 Medicago truncatula
MELO3C007722.2 Cucumis melo
Migut.K00786 Erythranthe guttata
MSTRG.15694 Avicennia marina
Nitab4.5_0001468g0050 Nicotiana tabacum
Nitab4.5_0010196g0030 Nicotiana tabacum
Nn5g29908 Nelumbo nucifera
Os08g0478100 Oryza sativa ssp. japonica
Peaxi162Scf00447g00119 Petunia axillaris
PGR102G1540 Punica granatum
PGSC0003DMG400016205 Solanum tuberosum
Phvul.003G289400 Phaseolus vulgaris
Potri.007G010400 Populus trichocarpa
Pp3c7_18820 Physcomitrium patens
PRCOL_00004912 Prasinoderma coloniale
Prupe.6G197200 Prunus persica
Psat4g119200 Pisum sativum
PSO541G2357 Papaver somniferum
QL06p047416 Quercus lobata
QL93p1865_0022 Quercus lobata
RcHm_v2.0_Chr2g0111411 Rosa chinensis
RcHm_v2.0_Chr2g0111431 Rosa chinensis
Rhsim08G0015000 Rhododendron simsii
Sabra07G0007900 Salix brachista
SalBow5G0849 Salvia bowleyana
Sc16g0000480 Simmondsia chinensis
Sed0018819 Sechium edule
SEGI_33925 Sequoiadendron giganteum
SGA_v2.0_scaffold52G19002 Striga asiatica
SMO004G0012 Selaginella moellendorffii
SMO361G0209 Selaginella moellendorffii
SMO361G0500 Selaginella moellendorffii
SMO361G0736 Selaginella moellendorffii
SMO361G0739 Selaginella moellendorffii
Solyc11g010510.2 Solanum lycopersicum
Sopen11g005290 Solanum pennellii
Sp7g10120 Schrenkiella parvula
THA.LOC104804173 Tarenaya hassleriana
Thecc.01G091900 Theobroma cacao
Thhalv10026114m.g Eutrema salsugineum
TPR.G14610 Trifolium pratense
TWI53G0307 Tripterygium wilfordii
unitig_748.g8645 Utricularia gibba
vmacro09229 Vaccinium macrocarpon
vmacro10806 Vaccinium macrocarpon
vmacro14991 Vaccinium macrocarpon
vmacro18230 Vaccinium macrocarpon
vmacro18321 Vaccinium macrocarpon
vmacro18566 Vaccinium macrocarpon
vmacro18567 Vaccinium macrocarpon
VMungo0251G0198 Vigna mungo
Zm00001eb038350 Zea mays

User provided reference genes

Program Settings