Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09730 Brassica napus
Aa31LG4G9830 Aethionema arabicum
Actinidia27067 Actinidia chinensis
Actinidia33576 Actinidia chinensis
Actinidia36923 Actinidia chinensis
AL7G44320 Arabidopsis lyrata
Aqoxy3G00630 Aquilegia oxysepala
Aqoxy6G00629 Aquilegia oxysepala
Aqoxy6G02622 Aquilegia oxysepala
Aqoxy6G02623 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea
AT5G35520 Arabidopsis thaliana
ATR0730G046 Amborella trichopoda
Atru.chr9.671 Acer truncatum
AUR62032161 Chenopodium quinoa
AUR62036917 Chenopodium quinoa
BcaB06g26945 Brassica carinata
BcaC02g09476 Brassica carinata
BolC4t25901H Brassica oleracea
BraA04t16635Z Brassica rapa
C04p43230 Brassica napus
CAN.G982.14 Capsicum annuum
CANSAT80G2620 Cannabis sativa
CARHR217490 Cardamine hirsuta
Carub.0007s3127 Capsella rubella
Ca_21735_v3 Cicer arietinum L.
Ca_24277_v3 Cicer arietinum L.
Cc04_g07860 Coffea canephora
CDE02G3865 Ceratophyllum demersum
Cfa019518 Carpinus fangiana
Ciclev10021913m.g Citrus clementina
CiPaw.16G081700 Carya illinoinensis
ClCG06G015230 Citrullus lanatus
COL.COLO4_08656 Corchorus olitorius
COL.COLO4_24165 Corchorus olitorius
Cpa.g.sc53.22 Carica papaya
Cpa.g.sc53.23 Carica papaya
CsaV3_1G003130 Cucumis sativus L.
CSS0007083 Camellia sinensis var. sinensis
DCAR_029598 Daucus carota
Dinv36853 Davidia involucrata
Duzib068G0691 Durio zibethinus
ECA232G1078 Erigeron canadensis
ECA246G4419 Erigeron canadensis
EL10Ac9g20981 Beta vulgaris
Eucgr.K02638 Eucalyptus grandis
FAN08G0928 Fragaria x ananassa
FAN13G1489 Fragaria x ananassa
FAN18G3466 Fragaria x ananassa
FvH4_5g13000 Fragaria vesca
Glyma.05G016300 Glycine max
Glyma.17G083800 Glycine max
Gohir.A11G034600 Gossypium hirsutum
Gohir.D03G089966 Gossypium hirsutum
Gohir.D11G038000 Gossypium hirsutum
Gorai.007G040700 Gossypium raimondii
Gorai.007G248400 Gossypium raimondii
Gorai.N008500 Gossypium raimondii
GSVIVG01008195001 Vitis vinifera
HanXRQChr16g0502011 Helianthus annuus
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla
HPP92_015441 Vanilla planifolia
Hund02537 Selenicereus undatus
Lalb_Chr13g0302571 Lupinus albus
Lj6g0003397 Lotus japonicus
Lj9A435T83 Lonicera japonica
Lsat_1_v5_gn_4_112761 Lactuca sativa
Lsat_1_v5_gn_4_112801 Lactuca sativa
Manes.01G023400 Manihot esculenta
Mapoly0051s0086 Marchantia polymorpha
MBI10_g16789_MAGBIO Magnolia biondii
MD06G1208100 Malus domestica
MD14G1218500 Malus domestica
Medtr4g110120 Medicago truncatula
Medtr4g112610 Medicago truncatula
Medtr4g112830 Medicago truncatula
MELO3C027390.2 Cucumis melo
MELO3C028557.2 Cucumis melo
Migut.D01482 Erythranthe guttata
MSTRG.4502 Avicennia marina
MSTRG.4503 Avicennia marina
Nitab4.5_0000646g0180 Nicotiana tabacum
Nitab4.5_0004342g0080 Nicotiana tabacum
Nn3g17620 Nelumbo nucifera
Oeu010193.1 Olea europaea
Os02g0620100 Oryza sativa ssp. japonica
Peaxi162Scf00119g00118 Petunia axillaris
PGR044G0997 Punica granatum
PGSC0003DMG400024511 Solanum tuberosum
Phvul.002G142200 Phaseolus vulgaris
Phvul.003G180600 Phaseolus vulgaris
Potri.015G055500 Populus trichocarpa
Pp3c2_13760 Physcomitrium patens
Prupe.5G212600 Prunus persica
Psat4g044400 Pisum sativum
PSO017G3209 Papaver somniferum
PSO478G3500 Papaver somniferum
QL10p021984 Quercus lobata
RcHm_v2.0_Chr7g0184161 Rosa chinensis
Rhsim08G0139600 Rhododendron simsii
Sabra15G0080700 Salix brachista
SalBow1G4471 Salvia bowleyana
Sc04g0004070 Simmondsia chinensis
Sed0015508 Sechium edule
SEGI_05525 Sequoiadendron giganteum
SGA_v2.0_scaffold42G16024 Striga asiatica
SHI18989 Sapria himalayana
Solyc03g114520.3 Solanum lycopersicum
Sopen03g033610 Solanum pennellii
Sp7g06840 Schrenkiella parvula
THA.LOC104819388 Tarenaya hassleriana
Thecc.03G113300 Theobroma cacao
Thhalv10003465m.g Eutrema salsugineum
TPR.G23873 Trifolium pratense
TWI81G0025 Tripterygium wilfordii
TWI81G0622 Tripterygium wilfordii
unitig_62.g23762 Utricularia gibba
vmacro17651 Vaccinium macrocarpon
vmacro17652 Vaccinium macrocarpon
VMungo1215G2864 Vigna mungo
Zm00001eb065850 Zea mays
Zm00001eb433940 Zea mays

User provided reference genes

Program Settings