Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p13930 Brassica napus
Aa31LG7G2670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3312 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3314 Anthoceros agrestis
Actinidia02441 Actinidia chinensis
Ah.01g007080 Amaranthus hybridus
AL1G30230 Arabidopsis lyrata
Aqoxy5G00814 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3DIB68 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XY5X2R Arachis hypogaea
AT1G17870 Arabidopsis thaliana
ATR0739G100 Amborella trichopoda
Atru.chr5.2289 Acer truncatum
Atru.chr5.2291 Acer truncatum
AUR62027024 Chenopodium quinoa
AUR62030866 Chenopodium quinoa
BcaB07g34011 Brassica carinata
BolC5t30327H Brassica oleracea
BraA06t24534Z Brassica rapa
C05p16250 Brassica napus
CAN.G606.71 Capsicum annuum
CANSAT25G1826 Cannabis sativa
CARHR018470 Cardamine hirsuta
Carub.0001s1760 Capsella rubella
Ca_20446_v3 Cicer arietinum L.
CBR_g47115 Chara braunii
CBR_g59393 Chara braunii
Cc02_g20060 Coffea canephora
Cfa004699 Carpinus fangiana
Ciclev10028052m.g Citrus clementina
CiPaw.05G020800 Carya illinoinensis
ClCG10G010040 Citrullus lanatus
COL.COLO4_32484 Corchorus olitorius
Cpa.g.c32619.1 Carica papaya
Cpa.g.c32619.2 Carica papaya
CsaV3_4G000080 Cucumis sativus L.
CSS0017857 Camellia sinensis var. sinensis
CSS0030074 Camellia sinensis var. sinensis
DCAR_021944 Daucus carota
Dinv09537 Davidia involucrata
Duzib132G0363 Durio zibethinus
ECA240G4721 Erigeron canadensis
EL10Ac9g22178 Beta vulgaris
Eucgr.G01188 Eucalyptus grandis
FAN15G1102 Fragaria x ananassa
FAN20G2135 Fragaria x ananassa
FAN24G2317 Fragaria x ananassa
FAN27G2374 Fragaria x ananassa
FvH4_2g03320 Fragaria vesca
Glyma.01G241500 Glycine max
Gohir.A01G009420 Gossypium hirsutum
Gohir.D01G009000 Gossypium hirsutum
Gorai.002G011000 Gossypium raimondii
GSVIVG01037052001 Vitis vinifera
HanXRQChr09g0250961 Helianthus annuus
Haze_10300 Corylus avellana
Hma1.2p1_0661F.1_g198080 Hydrangea macrophylla
HPP92_019978 Vanilla planifolia
HPP92_019979 Vanilla planifolia
HPP92_020044 Vanilla planifolia
Hund00420 Selenicereus undatus
Lj3g0024697 Lotus japonicus
Lj4g0015339 Lotus japonicus
Lj9C337G13 Lonicera japonica
Lsat_1_v5_gn_9_113340 Lactuca sativa
Manes.10G087000 Manihot esculenta
Mapoly0031s0097 Marchantia polymorpha
MBI16_g31132_MAGBIO Magnolia biondii
MD10G1110200 Malus domestica
Medtr3g069753 Medicago truncatula
Medtr4g010130 Medicago truncatula
Medtr5g093790 Medicago truncatula
Medtr6g011370 Medicago truncatula
Medtr8g064300 Medicago truncatula
Medtr8g487700 Medicago truncatula
MELO3C018023.2 Cucumis melo
Migut.B00463 Erythranthe guttata
MSTRG.16672 Avicennia marina
Nitab4.5_0001099g0050 Nicotiana tabacum
Nitab4.5_0010145g0010 Nicotiana tabacum
Nn5g30673 Nelumbo nucifera
Oeu037293.1 Olea europaea
Os03g0729000 Oryza sativa ssp. japonica
Peaxi162Scf00016g03133 Petunia axillaris
PGR042G2482 Punica granatum
PGSC0003DMG400025737 Solanum tuberosum
Phvul.002G050700 Phaseolus vulgaris
Potri.001G289700 Populus trichocarpa
Pp3c20_2440 Physcomitrium patens
Pp3c24_14160 Physcomitrium patens
Prupe.8G150400 Prunus persica
Psat7g257160 Pisum sativum
PSO478G2487 Papaver somniferum
PSO782G2024 Papaver somniferum
PSO782G2056 Papaver somniferum
PSO782G3094 Papaver somniferum
PSO782G3183 Papaver somniferum
PSO782G4930 Papaver somniferum
PSO782G5280 Papaver somniferum
QL04p021548 Quercus lobata
QL09p050079 Quercus lobata
RcHm_v2.0_Chr6g0248441 Rosa chinensis
RhsimUnG0040900 Rhododendron simsii
RhsimUnG0122900 Rhododendron simsii
Sabra16G0181300 Salix brachista
SalBow6G3392 Salvia bowleyana
Sc08g0004330 Simmondsia chinensis
Sed0021356 Sechium edule
SEGI_26002 Sequoiadendron giganteum
SEGI_29752 Sequoiadendron giganteum
SGA_v2.0_scaffold225G43062 Striga asiatica
SMO239G0018 Selaginella moellendorffii
Solyc01g106820.3 Solanum lycopersicum
Sopen01g049130 Solanum pennellii
Sp1g15950 Schrenkiella parvula
Sp1g15960 Schrenkiella parvula
TAR628G0543 Trochodendron aralioides
THA.LOC104812194 Tarenaya hassleriana
Thecc.02G120100 Theobroma cacao
Thhalv10007206m.g Eutrema salsugineum
TPR.G38635 Trifolium pratense
TWI59G1228 Tripterygium wilfordii
vmacro01945 Vaccinium macrocarpon
VMungo1215G0608 Vigna mungo
Zm00001eb056010 Zea mays

User provided reference genes

Program Settings