Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p09010 Brassica napus
A09p33660 Brassica napus
Aa31LG2G13410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4201 Anthoceros agrestis
Actinidia09219 Actinidia chinensis
Ah.12g054900 Amaranthus hybridus
AL1G46800 Arabidopsis lyrata
AL1G48020 Arabidopsis lyrata
Aqoxy5G02873 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AEP3KG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QRW6GR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YTUI1C Arachis hypogaea
AT1G32550 Arabidopsis thaliana
ATR0796G077 Amborella trichopoda
Atru.chr6.1742 Acer truncatum
AUR62007269 Chenopodium quinoa
AUR62018730 Chenopodium quinoa
BcaB04g17950 Brassica carinata
BcaB07g32954 Brassica carinata
BcaC07g37588 Brassica carinata
BolC5t31928H Brassica oleracea
BolC8t47934H Brassica oleracea
BraA08t32902Z Brassica rapa
BraA09t38912Z Brassica rapa
C05p32020 Brassica napus
CAN.G1659.5 Capsicum annuum
CANSAT21G0322 Cannabis sativa
CARHR032000 Cardamine hirsuta
Carub.0001s3096 Capsella rubella
Ca_22070_v3 Cicer arietinum L.
CBR_g24310 Chara braunii
Cc08_g02510 Coffea canephora
Cfa012418 Carpinus fangiana
Ciclev10032819m.g Citrus clementina
CiPaw.12G062300 Carya illinoinensis
ClCG09G012080 Citrullus lanatus
ClCG09G012090 Citrullus lanatus
COL.COLO4_17063 Corchorus olitorius
Cpa.g.sc71.69 Carica papaya
CsaV3_3G049310 Cucumis sativus L.
CSS0002978 Camellia sinensis var. sinensis
CSS0003148 Camellia sinensis var. sinensis
CSS0019133 Camellia sinensis var. sinensis
CSS0039884 Camellia sinensis var. sinensis
DCAR_024971 Daucus carota
Dinv25202 Davidia involucrata
Dinv28941 Davidia involucrata
Duzib084G0654 Durio zibethinus
Duzib205G0717 Durio zibethinus
ECA240G2404 Erigeron canadensis
EL10Ac5g12142 Beta vulgaris
Eucgr.E00291 Eucalyptus grandis
FAN04G0985 Fragaria x ananassa
FAN08G2939 Fragaria x ananassa
FAN10G1237 Fragaria x ananassa
FAN13G0612 Fragaria x ananassa
FAN18G2446 Fragaria x ananassa
FAN20G0396 Fragaria x ananassa
FvH4_5g21760 Fragaria vesca
Glyma.05G112100 Glycine max
Glyma.17G154900 Glycine max
Gohir.A12G209000 Gossypium hirsutum
Gohir.D12G211700 Gossypium hirsutum
Gorai.008G227300 Gossypium raimondii
GSVIVG01013191001 Vitis vinifera
HanXRQChr02g0043511 Helianthus annuus
Haze_08258 Corylus avellana
Hma1.2p1_0991F.1_g245020 Hydrangea macrophylla
HPP92_013491 Vanilla planifolia
HPP92_026045 Vanilla planifolia
Hund14407 Selenicereus undatus
Lalb_Chr05g0220541 Lupinus albus
Lj2A242T73 Lonicera japonica
Lj4g0008037 Lotus japonicus
Lsat_1_v5_gn_6_78541 Lactuca sativa
Manes.15G169000 Manihot esculenta
Mapoly0177s0016 Marchantia polymorpha
MBI18_g03873_MAGBIO Magnolia biondii
MCO07G595 Micromonas commoda
MD06G1032600 Malus domestica
MD16G1276600 Malus domestica
Medtr4g098490 Medicago truncatula
MELO3C003395.2 Cucumis melo
Migut.A01031 Erythranthe guttata
MSTRG.12139 Avicennia marina
Nitab4.5_0000089g0020 Nicotiana tabacum
Nitab4.5_0001276g0050 Nicotiana tabacum
Nitab4.5_0002373g0030 Nicotiana tabacum
Nn4g25240 Nelumbo nucifera
Os03g0685000 Oryza sativa ssp. japonica
Peaxi162Scf00006g00426 Petunia axillaris
PGR004G2142 Punica granatum
PGSC0003DMG400017532 Solanum tuberosum
Phvul.003G230200 Phaseolus vulgaris
Potri.003G090400 Populus trichocarpa
Potri.003G176400 Populus trichocarpa
Pp3c17_15760 Physcomitrium patens
PRCOL_00004887 Prasinoderma coloniale
Prupe.5G039500 Prunus persica
Psat4g078880 Pisum sativum
PSO170G4107 Papaver somniferum
PSO357G0477 Papaver somniferum
QL12p006043 Quercus lobata
RcHm_v2.0_Chr7g0209251 Rosa chinensis
Rhsim07G0125500 Rhododendron simsii
Sabra03G0060200 Salix brachista
SalBow6G2021 Salvia bowleyana
Sc07g0008750 Simmondsia chinensis
Sed0015821 Sechium edule
Sed0017672 Sechium edule
SEGI_19144 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30206 Striga asiatica
SMO134G0248 Selaginella moellendorffii
Solyc08g077050.3 Solanum lycopersicum
Sopen08g025630 Solanum pennellii
Sp1g28350 Schrenkiella parvula
TAR362G0922 Trochodendron aralioides
THA.LOC104814439 Tarenaya hassleriana
Thecc.03G229900 Theobroma cacao
Thhalv10008887m.g Eutrema salsugineum
TPR.G29030 Trifolium pratense
TWI81G0344 Tripterygium wilfordii
unitig_744.g24478 Utricularia gibba
vmacro14164 Vaccinium macrocarpon
Zm00001eb217230 Zea mays

User provided reference genes

Program Settings