Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03940 Brassica napus
A03p08120 Brassica napus
Aa31LG11G12610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis
Actinidia00694 Actinidia chinensis
Ah.08g212670 Amaranthus hybridus
AL6G28090 Arabidopsis lyrata
Aqoxy2G03109 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea
AT5G17070 Arabidopsis thaliana
ATR0213G006 Amborella trichopoda
Atru.chr7.1119 Acer truncatum
BcaB01g04960 Brassica carinata
BcaB01g05232 Brassica carinata
BcaC03g18532 Brassica carinata
BcaNung00427 Brassica carinata
BolC2t06790H Brassica oleracea
BolC3t13440H Brassica oleracea
BraA02t05358Z Brassica rapa
BraA03t10137Z Brassica rapa
C02p08760 Brassica napus
C03p09390 Brassica napus
C03p09450 Brassica napus
CAN.G317.12 Capsicum annuum
CANSAT21G0373 Cannabis sativa
CARHR196110 Cardamine hirsuta
Carub.0006s1525 Capsella rubella
Ca_04928_v3 Cicer arietinum L.
CBR_g17900 Chara braunii
Cc02_g00390 Coffea canephora
CDE02G3455 Ceratophyllum demersum
Cfa015892 Carpinus fangiana
Ciclev10021854m.g Citrus clementina
CiPaw.05G237500 Carya illinoinensis
CiPaw.06G019700 Carya illinoinensis
ClCG10G009050 Citrullus lanatus
COL.COLO4_13442 Corchorus olitorius
Cpa.g.sc39.77 Carica papaya
Cre10.g463700 Chlamydomonas reinhardtii
CsaV3_4G008720 Cucumis sativus L.
CSS0035893 Camellia sinensis var. sinensis
DCAR_020401 Daucus carota
Dinv06133 Davidia involucrata
Dinv29169 Davidia involucrata
Duzib211G0044 Durio zibethinus
ECA246G2850 Erigeron canadensis
EL10Ac7g17391 Beta vulgaris
Eucgr.A02962 Eucalyptus grandis
FAN01G2653 Fragaria x ananassa
FAN03G1142 Fragaria x ananassa
FAN03G2967 Fragaria x ananassa
FAN10G1961 Fragaria x ananassa
FAN10G2535 Fragaria x ananassa
FvH4_7g33790 Fragaria vesca
Glyma.11G092500 Glycine max
Glyma.12G018800 Glycine max
Gohir.A07G176900 Gossypium hirsutum
Gohir.D07G184401 Gossypium hirsutum
Gorai.001G204600 Gossypium raimondii
GSVIVG01024423001 Vitis vinifera
HanXRQChr17g0541681 Helianthus annuus
Haze_00598 Corylus avellana
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla
HPP92_026820 Vanilla planifolia
Hund18049 Selenicereus undatus
Lalb_Chr19g0139881 Lupinus albus
Lj1A1033G61 Lonicera japonica
Lj3g0017971 Lotus japonicus
Lsat_1_v5_gn_3_37940 Lactuca sativa
Manes.08G163800 Manihot esculenta
Mapoly0084s0069 Marchantia polymorpha
MBI06_g08525_MAGBIO Magnolia biondii
MCO07G107 Micromonas commoda
MD01G1234200 Malus domestica
MD07G1306400 Malus domestica
Medtr4g077610 Medicago truncatula
Medtr5g087635 Medicago truncatula
MELO3C024871.2 Cucumis melo
Migut.F00102 Erythranthe guttata
MSTRG.8579 Avicennia marina
Nitab4.5_0000001g0150 Nicotiana tabacum
Nitab4.5_0000820g0010 Nicotiana tabacum
Nn3g21321 Nelumbo nucifera
Oeu005324.1 Olea europaea
Os06g0300700 Oryza sativa ssp. japonica
Peaxi162Scf00076g00928 Petunia axillaris
PGR042G2784 Punica granatum
PGSC0003DMG401008641 Solanum tuberosum
PGSC0003DMG402008641 Solanum tuberosum
Phvul.011G021200 Phaseolus vulgaris
Potri.019G052400 Populus trichocarpa
Pp3c20_5600 Physcomitrium patens
Prupe.2G324400 Prunus persica
Psat1g047200 Pisum sativum
Psat1g047240 Pisum sativum
Psat1g047280 Pisum sativum
Psat7g171520 Pisum sativum
PSO170G0520 Papaver somniferum
PSO210G6912 Papaver somniferum
QL10p024490 Quercus lobata
RcHm_v2.0_Chr1g0383921 Rosa chinensis
RcHm_v2.0_Chr5g0041771 Rosa chinensis
Rhsim13G0016700 Rhododendron simsii
Sabra19G0056100 Salix brachista
Sabra19G0056200 Salix brachista
Sabra19G0056300 Salix brachista
SalBow4G3280 Salvia bowleyana
Sc05g0004440 Simmondsia chinensis
Sed0025457 Sechium edule
SEGI_01011 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08505 Striga asiatica
SMO141G0301 Selaginella moellendorffii
Solyc03g062680.3 Solanum lycopersicum
Sopen03g015000 Solanum pennellii
Sp6g27090 Schrenkiella parvula
TAR365G0740 Trochodendron aralioides
THA.LOC104820876 Tarenaya hassleriana
Thecc.03G000800 Theobroma cacao
Thhalv10014449m.g Eutrema salsugineum
TPR.G39567 Trifolium pratense
unitig_747.g21708 Utricularia gibba
vmacro02505 Vaccinium macrocarpon
VMungo1127G0993 Vigna mungo
Zm00001eb381130 Zea mays

User provided reference genes

Program Settings