Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p16880 Brassica napus
A08p11570 Brassica napus
Aa31LG9G2360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2679 Anthoceros agrestis
Actinidia01262 Actinidia chinensis
Actinidia32776 Actinidia chinensis
AL7G40860 Arabidopsis lyrata
Aqoxy1G01337 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Q8HZUY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZW16GX Arachis hypogaea
AT4G14965 Arabidopsis thaliana
ATR0737G147 Amborella trichopoda
Atru.chr8.945 Acer truncatum
AUR62015180 Chenopodium quinoa
AUR62017635 Chenopodium quinoa
BcaB02g07847 Brassica carinata
BcaC08g44258 Brassica carinata
BolC6t36868H Brassica oleracea
BraA05t20592Z Brassica rapa
BraA08t33149Z Brassica rapa
C06p16670 Brassica napus
CAN.G946.5 Capsicum annuum
CANSAT64G1607 Cannabis sativa
CARHR221600 Cardamine hirsuta
Carub.0007s2713 Capsella rubella
Ca_16310_v3 Cicer arietinum L.
CBR_g19221 Chara braunii
Cc05_g00620 Coffea canephora
Cfa017853 Carpinus fangiana
Ciclev10009311m.g Citrus clementina
CiPaw.15G093100 Carya illinoinensis
CiPaw.15G093200 Carya illinoinensis
ClCG11G016700 Citrullus lanatus
COL.COLO4_29916 Corchorus olitorius
COL.COLO4_33717 Corchorus olitorius
Cpa.g.sc8.298 Carica papaya
Cre03.g148100 Chlamydomonas reinhardtii
CsaV3_4G032210 Cucumis sativus L.
CSS0005885 Camellia sinensis var. sinensis
CSS0012855 Camellia sinensis var. sinensis
CSS0020773 Camellia sinensis var. sinensis
CSS0046766 Camellia sinensis var. sinensis
CSS0048073 Camellia sinensis var. sinensis
DCAR_009833 Daucus carota
Dinv26512 Davidia involucrata
Duzib147G0458 Durio zibethinus
ECA246G1127 Erigeron canadensis
EL10Ac9g22887 Beta vulgaris
Eucgr.K01331 Eucalyptus grandis
FAN05G0502 Fragaria x ananassa
FAN09G0641 Fragaria x ananassa
FAN14G5422 Fragaria x ananassa
FvH4_6g40100 Fragaria vesca
Glyma.13G004000 Glycine max
Glyma.20G065200 Glycine max
Gohir.A12G087400 Gossypium hirsutum
Gohir.D08G123050 Gossypium hirsutum
Gohir.D12G085600 Gossypium hirsutum
Gorai.005G203300 Gossypium raimondii
Gorai.007G262800 Gossypium raimondii
Gorai.008G096000 Gossypium raimondii
GSVIVG01012987001 Vitis vinifera
HanXRQChr17g0540961 Helianthus annuus
Haze_18340 Corylus avellana
Hma1.2p1_0451F.1_g155730 Hydrangea macrophylla
HPP92_021470 Vanilla planifolia
Hund24326 Selenicereus undatus
Hund24327 Selenicereus undatus
Lalb_Chr22g0360801 Lupinus albus
Lj3A1010G53 Lonicera japonica
Lj6g0003976 Lotus japonicus
Lsat_1_v5_gn_3_36241 Lactuca sativa
Manes.09G000100 Manihot esculenta
Mapoly0115s0059 Marchantia polymorpha
MBI07_g10945_MAGBIO Magnolia biondii
MCO15G416 Micromonas commoda
MD09G1135300 Malus domestica
Medtr3g081290 Medicago truncatula
MELO3C026394.2 Cucumis melo
Migut.C00287 Erythranthe guttata
MSTRG.24998 Avicennia marina
Nitab4.5_0006644g0050 Nicotiana tabacum
Nn3g18046 Nelumbo nucifera
Nn3g18048 Nelumbo nucifera
Oeu011642.1 Olea europaea
Os03g0205500 Oryza sativa ssp. japonica
Peaxi162Scf00351g00618 Petunia axillaris
Peaxi162Scf01158g00018 Petunia axillaris
PGR004G2515 Punica granatum
PGSC0003DMG400000936 Solanum tuberosum
Phvul.006G002200 Phaseolus vulgaris
Potri.006G023801 Populus trichocarpa
Potri.016G022700 Populus trichocarpa
Pp3c18_20590 Physcomitrium patens
Pp3c21_2980 Physcomitrium patens
PRCOL_00003273 Prasinoderma coloniale
Prupe.3G191400 Prunus persica
Psat5g107960 Pisum sativum
PSO541G2638 Papaver somniferum
PSO675G0146 Papaver somniferum
RcHm_v2.0_Chr2g0154731 Rosa chinensis
Rhsim11G0024700 Rhododendron simsii
Sabra06G0017300 Salix brachista
Sabra16G0023400 Salix brachista
Sabra16G0028900 Salix brachista
SalBow7G2372 Salvia bowleyana
Sc06g0005840 Simmondsia chinensis
Sed0019883 Sechium edule
SEGI_23922 Sequoiadendron giganteum
SGA_v2.0_scaffold26G11309 Striga asiatica
SGA_v2.0_scaffold42G15890 Striga asiatica
SHI11338 Sapria himalayana
SMO367G0820 Selaginella moellendorffii
Solyc07g044830.3 Solanum lycopersicum
Sopen07g023380 Solanum pennellii
Sp7g13140 Schrenkiella parvula
TAR624G0611 Trochodendron aralioides
THA.LOC104803019 Tarenaya hassleriana
Thecc.01G164300 Theobroma cacao
Thhalv10026107m.g Eutrema salsugineum
TPR.G31172 Trifolium pratense
TWI60G0958 Tripterygium wilfordii
vmacro00060 Vaccinium macrocarpon
VMungo0540G1919 Vigna mungo
Zm00001eb400650 Zea mays

User provided reference genes

Program Settings