Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p02350 Brassica napus
Aa31LG5G2580 Aethionema arabicum
Actinidia21179 Actinidia chinensis
Actinidia21180 Actinidia chinensis
Actinidia21185 Actinidia chinensis
Actinidia24960 Actinidia chinensis
Actinidia25205 Actinidia chinensis
Actinidia25207 Actinidia chinensis
Actinidia26718 Actinidia chinensis
AL6G49900 Arabidopsis lyrata
Aqoxy2G03584 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CR0LD7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0WEAV Arachis hypogaea
AT4G03030 Arabidopsis thaliana
ATR0001G015 Amborella trichopoda
Atru.chr5.1628 Acer truncatum
AUR62011906 Chenopodium quinoa
AUR62024747 Chenopodium quinoa
BcaB01g01932 Brassica carinata
BcaB01g01987 Brassica carinata
BcaB01g01988 Brassica carinata
CAN.G461.9 Capsicum annuum
CARHR251420 Cardamine hirsuta
Carub.0006s3402 Capsella rubella
Ca_08658_v3 Cicer arietinum L.
Cc01_g18580 Coffea canephora
Cc11_g03640 Coffea canephora
CDE06G0260 Ceratophyllum demersum
Cfa002386 Carpinus fangiana
Ciclev10023054m.g Citrus clementina
CiPaw.03G260100 Carya illinoinensis
ClCG07G000850 Citrullus lanatus
COL.COLO4_05590 Corchorus olitorius
Cpa.g.sc1893.1 Carica papaya
CsaV3_3G022380 Cucumis sativus L.
CSS0020067 Camellia sinensis var. sinensis
DCAR_012527 Daucus carota
Dinv22449 Davidia involucrata
Duzib138G0790 Durio zibethinus
ECA247G3796 Erigeron canadensis
EL10Ac5g10432 Beta vulgaris
Eucgr.B01523 Eucalyptus grandis
FAN03G1708 Fragaria x ananassa
FAN11G3918 Fragaria x ananassa
FAN12G3317 Fragaria x ananassa
FAN15G3465 Fragaria x ananassa
FAN27G0980 Fragaria x ananassa
FvH4_2g22060 Fragaria vesca
Glyma.03G160600 Glycine max
Glyma.19G162400 Glycine max
Gohir.A08G060800 Gossypium hirsutum
Gohir.D08G070000 Gossypium hirsutum
Gorai.004G073600 Gossypium raimondii
GSVIVG01028288001 Vitis vinifera
HanXRQChr04g0113711 Helianthus annuus
HanXRQChr15g0468011 Helianthus annuus
Haze_24583 Corylus avellana
Hma1.2p1_0975F.1_g243200 Hydrangea macrophylla
HPP92_004179 Vanilla planifolia
Hund09582 Selenicereus undatus
Lj1A62G12 Lonicera japonica
Lj1g0004098 Lotus japonicus
Lsat_1_v5_gn_8_91500 Lactuca sativa
Lsat_1_v5_gn_9_9360 Lactuca sativa
Manes.05G087000 Manihot esculenta
MBI11_g40182_MAGBIO Magnolia biondii
MD00G1178000 Malus domestica
MD05G1201800 Malus domestica
MD10G1188500 Malus domestica
MD10G1189700 Malus domestica
MD11G1223300 Malus domestica
MD12G1052200 Malus domestica
MD12G1052300 Malus domestica
MD14G1118900 Malus domestica
MD14G1119000 Malus domestica
MD15G1271700 Malus domestica
Medtr7g096420 Medicago truncatula
MELO3C024047.2 Cucumis melo
Migut.N02192 Erythranthe guttata
MSTRG.17481 Avicennia marina
Nitab4.5_0000086g0200 Nicotiana tabacum
Nitab4.5_0025910g0010 Nicotiana tabacum
Nn1g02659 Nelumbo nucifera
Oeu025811.1 Olea europaea
Oeu025818.1 Olea europaea
Os02g0316200 Oryza sativa ssp. japonica
Os03g0196450 Oryza sativa ssp. japonica
Peaxi162Scf00719g00111 Petunia axillaris
PGR119G2381 Punica granatum
PGSC0003DMG400031427 Solanum tuberosum
Phvul.001G158600 Phaseolus vulgaris
Potri.002G041900 Populus trichocarpa
Potri.005G221300 Populus trichocarpa
Pp3c3_23580 Physcomitrium patens
Prupe.8G228200 Prunus persica
Psat3g059160 Pisum sativum
PSO017G6594 Papaver somniferum
PSO063G0349 Papaver somniferum
PSO063G4163 Papaver somniferum
QL12p043064 Quercus lobata
RcHm_v2.0_Chr2g0136411 Rosa chinensis
RcHm_v2.0_Chr6g0288931 Rosa chinensis
Rhsim01G0267000 Rhododendron simsii
Sabra02G0033600 Salix brachista
Sc22g0000050 Simmondsia chinensis
Sc22g0000090 Simmondsia chinensis
Sc24g0004360 Simmondsia chinensis
Sed0002068 Sechium edule
SEGI_40175 Sequoiadendron giganteum
SGA_v2.0_scaffold98G29331 Striga asiatica
SMO271G0106 Selaginella moellendorffii
Solyc09g066210.4 Solanum lycopersicum
Sopen09g027940 Solanum pennellii
Sp6g03070 Schrenkiella parvula
TAR636G0887 Trochodendron aralioides
THA.LOC104799511 Tarenaya hassleriana
THA.LOC104824168 Tarenaya hassleriana
Thecc.01G263300 Theobroma cacao
Thhalv10028657m.g Eutrema salsugineum
TPR.G5783 Trifolium pratense
TWI12G0559 Tripterygium wilfordii
TWI18G0116 Tripterygium wilfordii
vmacro14858 Vaccinium macrocarpon
VMungo1383G2245 Vigna mungo
Zm00001eb235230 Zea mays

User provided reference genes

Program Settings