Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p02670 Brassica napus
Aa31LG10G3410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.166 Anthoceros agrestis
Actinidia01838 Actinidia chinensis
Ah.06g193130 Amaranthus hybridus
AL1G58910 Arabidopsis lyrata
Aqoxy1G00024 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TN3NK4 Arachis hypogaea
AT1G51110 Arabidopsis thaliana
ATR0807G171 Amborella trichopoda
Atru.BG.108.p Acer truncatum
Atru.chr3.2139 Acer truncatum
AUR62000042 Chenopodium quinoa
AUR62019212 Chenopodium quinoa
BcaB07g33557 Brassica carinata
BcaB07g33599 Brassica carinata
BcaC08g43281 Brassica carinata
BcaC08g43283 Brassica carinata
BolC6t35740H Brassica oleracea
BolC6t35742H Brassica oleracea
BraA06t23476Z Brassica rapa
C06p06310 Brassica napus
CAN.G140.8 Capsicum annuum
CANSAT54G1685 Cannabis sativa
CARHR041130 Cardamine hirsuta
Carub.0001s4002 Capsella rubella
Ca_11387_v3 Cicer arietinum L.
Cc01_g03170 Coffea canephora
CDE04G2070 Ceratophyllum demersum
Cfa009639 Carpinus fangiana
Ciclev10015496m.g Citrus clementina
CiPaw.14G129700 Carya illinoinensis
ClCG02G023710 Citrullus lanatus
COL.COLO4_10429 Corchorus olitorius
Cpa.g.sc1127.1 Carica papaya
Cpa.g.sc1127.2 Carica papaya
Cre03.g176350 Chlamydomonas reinhardtii
CsaV3_4G023700 Cucumis sativus L.
CSS0000942 Camellia sinensis var. sinensis
CSS0018817 Camellia sinensis var. sinensis
CSS0022118 Camellia sinensis var. sinensis
DCAR_024375 Daucus carota
Dinv36328 Davidia involucrata
Duzib150G0556 Durio zibethinus
ECA248G2469 Erigeron canadensis
EL10Ac4g10334 Beta vulgaris
Eucgr.B02608 Eucalyptus grandis
FAN16G0252 Fragaria x ananassa
FAN17G2784 Fragaria x ananassa
FvH4_3g44350 Fragaria vesca
Glyma.03G107232 Glycine max
Glyma.10G294800 Glycine max
Glyma.20G055350 Glycine max
Glyma.20G244500 Glycine max
Gohir.A08G078500 Gossypium hirsutum
Gohir.D08G088366 Gossypium hirsutum
Gorai.004G092800 Gossypium raimondii
GSVIVG01025367001 Vitis vinifera
HanXRQChr11g0345451 Helianthus annuus
Haze_23007 Corylus avellana
Hma1.2p1_0050F.1_g029070 Hydrangea macrophylla
Hma1.2p1_0238F.1_g099790 Hydrangea macrophylla
Hma1.2p1_0535F.1_g173790 Hydrangea macrophylla
HPP92_008464 Vanilla planifolia
HPP92_008465 Vanilla planifolia
HPP92_023881 Vanilla planifolia
Hund07562 Selenicereus undatus
Lalb_Chr02g0144221 Lupinus albus
Lj2A674T44 Lonicera japonica
Lj5g0002595 Lotus japonicus
Lsat_1_v5_gn_1_68460 Lactuca sativa
Manes.03G089800 Manihot esculenta
Mapoly0065s0038 Marchantia polymorpha
MBI06_g07792_MAGBIO Magnolia biondii
MCO09G399 Micromonas commoda
MCO12G476 Micromonas commoda
MD03G1014600 Malus domestica
MD11G1015800 Malus domestica
Medtr1g116320 Medicago truncatula
MELO3C014648.2 Cucumis melo
Migut.D00538 Erythranthe guttata
Nitab4.5_0003436g0040 Nicotiana tabacum
Nitab4.5_0005041g0010 Nicotiana tabacum
Nn2g15694 Nelumbo nucifera
Oeu058541.2 Olea europaea
Os07g0470700 Oryza sativa ssp. japonica
Peaxi162Scf00192g00019 Petunia axillaris
PGR119G1893 Punica granatum
PGSC0003DMG400032149 Solanum tuberosum
Phvul.007G005400 Phaseolus vulgaris
Potri.001G011700 Populus trichocarpa
Pp3c6_24510 Physcomitrium patens
Prupe.6G013900 Prunus persica
PSO339G4609 Papaver somniferum
PSO384G4606 Papaver somniferum
QL01p009947 Quercus lobata
QL01p009975 Quercus lobata
RcHm_v2.0_Chr5g0080731 Rosa chinensis
Rhsim13G0227500 Rhododendron simsii
Sabra01G0008700 Salix brachista
Sc09g0000330 Simmondsia chinensis
Sed0014420 Sechium edule
SEGI_10329 Sequoiadendron giganteum
SEGI_16251 Sequoiadendron giganteum
SEGI_30485 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00759 Striga asiatica
SMO118G0318 Selaginella moellendorffii
SMO145G0194 Selaginella moellendorffii
SMO222G0017 Selaginella moellendorffii
Solyc01g006330.4 Solanum lycopersicum
Sopen01g002330 Solanum pennellii
Sp1g37840 Schrenkiella parvula
TAR633G2634 Trochodendron aralioides
THA.LOC104810430 Tarenaya hassleriana
Thecc.09G216800 Theobroma cacao
Thhalv10011532m.g Eutrema salsugineum
TPR.G10386 Trifolium pratense
TWI34G0094 Tripterygium wilfordii
TWI34G1842 Tripterygium wilfordii
TWI60G1314 Tripterygium wilfordii
TWI60G1657 Tripterygium wilfordii
unitig_0.g179 Utricularia gibba
vmacro21759 Vaccinium macrocarpon
VMungo0720G2736 Vigna mungo
Zm00001eb320130 Zea mays

User provided reference genes

Program Settings