Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p22010 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis
Actinidia35469 Actinidia chinensis
Actinidia37077 Actinidia chinensis
Ah.08g215640 Amaranthus hybridus
Ah.15g095880 Amaranthus hybridus
AL5G22540 Arabidopsis lyrata
Aqoxy2G01095 Aquilegia oxysepala
Aqoxy4G02740 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea
AT3G44380 Arabidopsis thaliana
ATR0820G064 Amborella trichopoda
ATR0820G128 Amborella trichopoda
ATR0820G202 Amborella trichopoda
Atru.chr3.3206 Acer truncatum
Atru.chr3.3208 Acer truncatum
AUR62009745 Chenopodium quinoa
AUR62036192 Chenopodium quinoa
AUR62036200 Chenopodium quinoa
AUR62036201 Chenopodium quinoa
AUR62044742 Chenopodium quinoa
BcaB01g01165 Brassica carinata
BcaC01g02047 Brassica carinata
BolC3t19173H Brassica oleracea
BraA06t25289Z Brassica rapa
C03p69190 Brassica napus
CANSAT54G2809 Cannabis sativa
CARHR104480 Cardamine hirsuta
Carub.0005s1011 Capsella rubella
Ca_19414_v3 Cicer arietinum L.
Ca_26666_v3 Cicer arietinum L.
CBR_g44534 Chara braunii
Cc01_g08980 Coffea canephora
Cfa010003 Carpinus fangiana
Ciclev10029363m.g Citrus clementina
CiPaw.13G134700 Carya illinoinensis
ClCG02G022220 Citrullus lanatus
Cpa.g.sc195.8 Carica papaya
CsaV3_6G038350 Cucumis sativus L.
CSS0003287 Camellia sinensis var. sinensis
DCAR_006168 Daucus carota
Dinv22833 Davidia involucrata
Dinv42541 Davidia involucrata
Duzib150G0376 Durio zibethinus
ECA248G3754 Erigeron canadensis
EL10Ac7g15835 Beta vulgaris
Eucgr.J00502 Eucalyptus grandis
FAN11G2870 Fragaria x ananassa
FAN21G3578 Fragaria x ananassa
FAN25G2095 Fragaria x ananassa
FvH4_3g25140 Fragaria vesca
FvH4_3g25160 Fragaria vesca
Glyma.11G182400 Glycine max
Glyma.12G090400 Glycine max
Gohir.A07G110700 Gossypium hirsutum
Gohir.A08G005700 Gossypium hirsutum
Gohir.D07G114400 Gossypium hirsutum
Gohir.D08G016000 Gossypium hirsutum
Gorai.001G122700 Gossypium raimondii
Gorai.004G010300 Gossypium raimondii
GSVIVG01036107001 Vitis vinifera
HanXRQChr01g0024501 Helianthus annuus
Haze_23361 Corylus avellana
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla
Lalb_Chr01g0004891 Lupinus albus
Lalb_Chr03g0028161 Lupinus albus
Lj2P966T16 Lonicera japonica
Lj3g0017887 Lotus japonicus
Lsat_1_v5_gn_1_59200 Lactuca sativa
Manes.11G162800 Manihot esculenta
Mapoly0079s0020 Marchantia polymorpha
MBI01_g14623_MAGBIO Magnolia biondii
MD03G1147800 Malus domestica
MD11G1166600 Malus domestica
Medtr4g052840 Medicago truncatula
MELO3C014499.2 Cucumis melo
Migut.N02483 Erythranthe guttata
MSTRG.12374 Avicennia marina
Nitab4.5_0005641g0010 Nicotiana tabacum
Nitab4.5_0006120g0030 Nicotiana tabacum
Nn6g34849 Nelumbo nucifera
Nn6g34850 Nelumbo nucifera
Os08g0558300 Oryza sativa ssp. japonica
PGR102G0344 Punica granatum
PGR119G0351 Punica granatum
PGSC0003DMG400026335 Solanum tuberosum
Phvul.011G095000 Phaseolus vulgaris
Potri.001G218400 Populus trichocarpa
Pp3c21_10640 Physcomitrium patens
Pp3c2_16750 Physcomitrium patens
Pp3c9_9450 Physcomitrium patens
Prupe.6G132600 Prunus persica
Prupe.6G132700 Prunus persica
Psat7g187640 Pisum sativum
PSO339G1489 Papaver somniferum
PSO339G3266 Papaver somniferum
PSO384G0917 Papaver somniferum
PSO801G0234 Papaver somniferum
QL01p012073 Quercus lobata
QL01p012091 Quercus lobata
RcHm_v2.0_Chr5g0046191 Rosa chinensis
RcHm_v2.0_Chr5g0046241 Rosa chinensis
Rhsim01G0204700 Rhododendron simsii
Sabra16G0125700 Salix brachista
SalBow3G2384 Salvia bowleyana
Sc06g0008780 Simmondsia chinensis
Sc21g0007020 Simmondsia chinensis
Sed0020794 Sechium edule
SEGI_40876 Sequoiadendron giganteum
SGA_v2.0_scaffold177G39425 Striga asiatica
SMO347G0335 Selaginella moellendorffii
Solyc11g068550.1 Solanum lycopersicum
Sopen11g027270 Solanum pennellii
Sp5g16810 Schrenkiella parvula
TAR633G1946 Trochodendron aralioides
THA.LOC104814785 Tarenaya hassleriana
Thecc.09G281200 Theobroma cacao
Thhalv10010749m.g Eutrema salsugineum
TPR.G17225 Trifolium pratense
TWI75G1708 Tripterygium wilfordii
TWI79G0514 Tripterygium wilfordii
unitig_699.g19178 Utricularia gibba
VMungo1127G1055 Vigna mungo
Zm00001eb091070 Zea mays

User provided reference genes

Program Settings