Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p21360 Brassica napus
A05p07550 Brassica napus
Aa31LG5G23800 Aethionema arabicum
Actinidia11518 Actinidia chinensis
Actinidia29043 Actinidia chinensis
Ah.08g209640 Amaranthus hybridus
AL4G35790 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.0YL58U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FA4IPG Arachis hypogaea
AT2G38500 Arabidopsis thaliana
ATR0681G315 Amborella trichopoda
Atru.chr8.2382 Acer truncatum
AUR62006369 Chenopodium quinoa
AUR62029702 Chenopodium quinoa
BcaB01g03677 Brassica carinata
BcaB01g03678 Brassica carinata
BcaB02g09176 Brassica carinata
BcaB02g09177 Brassica carinata
BcaC01g05532 Brassica carinata
BcaC02g12001 Brassica carinata
BolC3t14918H Brassica oleracea
BolC4t22493H Brassica oleracea
BraA03t11371Z Brassica rapa
BraA05t19722Z Brassica rapa
C03p25230 Brassica napus
C04p09030 Brassica napus
CANSAT35G0573 Cannabis sativa
CARHR133200 Cardamine hirsuta
Carub.0004s2049 Capsella rubella
Ca_07754_v3 Cicer arietinum L.
Ca_29600_v3 Cicer arietinum L.
Cfa017056 Carpinus fangiana
Ciclev10012094m.g Citrus clementina
CiPaw.09G219300 Carya illinoinensis
CiPaw.09G219500 Carya illinoinensis
ClCG04G006410 Citrullus lanatus
COL.COLO4_16552 Corchorus olitorius
COL.COLO4_16553 Corchorus olitorius
Cpa.g.c45395 Carica papaya
CsaV3_4G027090 Cucumis sativus L.
CSS0001064 Camellia sinensis var. sinensis
CSS0032329 Camellia sinensis var. sinensis
DCAR_018544 Daucus carota
Dinv11379 Davidia involucrata
Dinv25324 Davidia involucrata
Duzib151G0311 Durio zibethinus
Duzib212G0771 Durio zibethinus
ECA236G3817 Erigeron canadensis
ECA248G0672 Erigeron canadensis
EL10Ac7g17070 Beta vulgaris
Eucgr.K01277 Eucalyptus grandis
FAN02G1449 Fragaria x ananassa
FAN05G4939 Fragaria x ananassa
FAN05G5674 Fragaria x ananassa
FAN09G0411 Fragaria x ananassa
FAN14G4939 Fragaria x ananassa
FvH4_6g10130 Fragaria vesca
Glyma.18G215200 Glycine max
Gohir.A10G149700 Gossypium hirsutum
Gohir.D10G117100 Gossypium hirsutum
Gorai.011G129000 Gossypium raimondii
GSVIVG01030203001 Vitis vinifera
HanXRQChr14g0433401 Helianthus annuus
HanXRQChr16g0509461 Helianthus annuus
Haze_21157 Corylus avellana
Hma1.2p1_1052F.1_g252320 Hydrangea macrophylla
HPP92_022856 Vanilla planifolia
Hund19788 Selenicereus undatus
Lalb_Chr19g0124031 Lupinus albus
Lj1g0007888 Lotus japonicus
Lsat_1_v5_gn_5_150140 Lactuca sativa
Lsat_1_v5_gn_8_107941 Lactuca sativa
Manes.08G173800 Manihot esculenta
Manes.09G116500 Manihot esculenta
MBI03_g38281_MAGBIO Magnolia biondii
MD12G1185800 Malus domestica
Medtr7g072635 Medicago truncatula
Medtr7g072870 Medicago truncatula
MELO3C025210.2 Cucumis melo
Migut.J00057 Erythranthe guttata
MSTRG.18951 Avicennia marina
Nitab4.5_0001469g0020 Nicotiana tabacum
Nitab4.5_0001697g0120 Nicotiana tabacum
Nitab4.5_0003003g0010 Nicotiana tabacum
Nitab4.5_0003003g0040 Nicotiana tabacum
Nn2g10337 Nelumbo nucifera
Nn5g27560 Nelumbo nucifera
Oeu026960.1 Olea europaea
Os01g0823400 Oryza sativa ssp. japonica
Peaxi162Scf00732g00043 Petunia axillaris
PGR004G2035 Punica granatum
PGSC0003DMG400004416 Solanum tuberosum
Phvul.008G084100 Phaseolus vulgaris
Potri.016G134500 Populus trichocarpa
Prupe.6G291400 Prunus persica
Psat3g120040 Pisum sativum
PSO339G6092 Papaver somniferum
PSO384G2070 Papaver somniferum
QL07p032560 Quercus lobata
RcHm_v2.0_Chr3g0460831 Rosa chinensis
Rhsim05G0229500 Rhododendron simsii
Sabra04G0151900 Salix brachista
SalBow5G5035 Salvia bowleyana
SalBow5G5483 Salvia bowleyana
Sc07g0005810 Simmondsia chinensis
Sc20g0006870 Simmondsia chinensis
Sed0002935 Sechium edule
SGA_v2.0_scaffold85G26642 Striga asiatica
Solyc09g018180.3 Solanum lycopersicum
Solyc10g050460.1 Solanum lycopersicum
Sopen09g010850 Solanum pennellii
Sp4g20840 Schrenkiella parvula
TAR636G2144 Trochodendron aralioides
THA.LOC104806639 Tarenaya hassleriana
Thecc.04G154100 Theobroma cacao
Thhalv10016859m.g Eutrema salsugineum
TPR.G26913 Trifolium pratense
TWI74G0177 Tripterygium wilfordii
vmacro20360 Vaccinium macrocarpon
VMungo1383G2355 Vigna mungo
Zm00001eb050050 Zea mays
Zm00001eb080740 Zea mays
Zm00001eb080750 Zea mays
Zm00001eb287510 Zea mays
Zm00001eb368790 Zea mays

User provided reference genes

Program Settings