Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p04940 Brassica napus
Aa31LG1G26310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis
Actinidia18353 Actinidia chinensis
Actinidia26517 Actinidia chinensis
AL4G43840 Arabidopsis lyrata
Aqoxy3G02683 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea
AT2G44760 Arabidopsis thaliana
ATR0665G564 Amborella trichopoda
Atru.chr5.115 Acer truncatum
Atru.chr5.116 Acer truncatum
AUR62013752 Chenopodium quinoa
AUR62023399 Chenopodium quinoa
BcaB02g08857 Brassica carinata
BcaB08g35012 Brassica carinata
BcaC02g11397 Brassica carinata
BcaC02g12272 Brassica carinata
BolC4t22205H Brassica oleracea
BraA05t19467Z Brassica rapa
C04p05760 Brassica napus
CAN.G768.2 Capsicum annuum
CANSAT25G2006 Cannabis sativa
CARHR139980 Cardamine hirsuta
Carub.0004s2733 Capsella rubella
Ca_14805_v3 Cicer arietinum L.
CBR_g48168 Chara braunii
CBR_g48169 Chara braunii
Cc02_g25170 Coffea canephora
CDE06G0422 Ceratophyllum demersum
CDE06G1994 Ceratophyllum demersum
Cfa011061 Carpinus fangiana
Ciclev10019814m.g Citrus clementina
CiPaw.14G019800 Carya illinoinensis
ClCG05G000130 Citrullus lanatus
COL.COLO4_10413 Corchorus olitorius
COL.COLO4_10415 Corchorus olitorius
COL.COLO4_12394 Corchorus olitorius
Cpa.g.sc22.25 Carica papaya
Cre16.g684900 Chlamydomonas reinhardtii
CsaV3_3G007240 Cucumis sativus L.
CSS0005629 Camellia sinensis var. sinensis
CSS0047635 Camellia sinensis var. sinensis
DCAR_025059 Daucus carota
Dinv44052 Davidia involucrata
Duzib133G0621 Durio zibethinus
Duzib138G0679 Durio zibethinus
ECA234G3853 Erigeron canadensis
EL10Ac1g00751 Beta vulgaris
Eucgr.D01222 Eucalyptus grandis
FAN01G1631 Fragaria x ananassa
FAN03G0097 Fragaria x ananassa
FAN06G2435 Fragaria x ananassa
FAN06G3766 Fragaria x ananassa
FAN10G0415 Fragaria x ananassa
FAN10G1159 Fragaria x ananassa
FvH4_7g10380 Fragaria vesca
Glyma.06G240000 Glycine max
Glyma.12G152700 Glycine max
Gohir.A12G097600 Gossypium hirsutum
Gohir.D12G100600 Gossypium hirsutum
Gorai.008G109500 Gossypium raimondii
GSVIVG01018294001 Vitis vinifera
HanXRQChr09g0257941 Helianthus annuus
HanXRQChr17g0562521 Helianthus annuus
Haze_02860 Corylus avellana
HPP92_012970 Vanilla planifolia
Hund17097 Selenicereus undatus
Lalb_Chr12g0210531 Lupinus albus
Lj3g0017960 Lotus japonicus
Lj9A555T32 Lonicera japonica
Lj9C555G1 Lonicera japonica
Lsat_1_v5_gn_4_39300 Lactuca sativa
Manes.05G055800 Manihot esculenta
Mapoly0089s0048 Marchantia polymorpha
MD07G1109900 Malus domestica
Medtr8g007155 Medicago truncatula
MELO3C005945.2 Cucumis melo
Migut.B01523 Erythranthe guttata
MSTRG.20684 Avicennia marina
Nitab4.5_0000228g0070 Nicotiana tabacum
Nitab4.5_0009461g0020 Nicotiana tabacum
Nn1g00813 Nelumbo nucifera
Oeu011251.1 Olea europaea
Os04g0545200 Oryza sativa ssp. japonica
Peaxi162Scf00103g00911 Petunia axillaris
Peaxi162Scf00103g00912 Petunia axillaris
Peaxi162Scf00562g00069 Petunia axillaris
Peaxi162Scf00562g00611 Petunia axillaris
Peaxi162Scf00562g00612 Petunia axillaris
PGR004G1920 Punica granatum
PGSC0003DMG400003447 Solanum tuberosum
PGSC0003DMG400026373 Solanum tuberosum
Phvul.010G046700 Phaseolus vulgaris
Potri.002G138600 Populus trichocarpa
Pp3c5_3810 Physcomitrium patens
Prupe.2G133500 Prunus persica
Psat4g223640 Pisum sativum
PSO782G2130 Papaver somniferum
QL04p029920 Quercus lobata
RcHm_v2.0_Chr1g0348081 Rosa chinensis
Rhsim07G0037100 Rhododendron simsii
Sabra02G0107400 Salix brachista
SalBow8G3479 Salvia bowleyana
Sc26g0001660 Simmondsia chinensis
Sed0012570 Sechium edule
SEGI_14599 Sequoiadendron giganteum
SEGI_30390 Sequoiadendron giganteum
SEGI_37248 Sequoiadendron giganteum
SGA_v2.0_scaffold52G19234 Striga asiatica
Solyc10g037890.3 Solanum lycopersicum
Solyc10g037900.1 Solanum lycopersicum
Sopen10g011810 Solanum pennellii
Sp4g26830 Schrenkiella parvula
TAR375G1150 Trochodendron aralioides
THA.LOC104802498 Tarenaya hassleriana
Thecc.01G396400 Theobroma cacao
Thhalv10001417m.g Eutrema salsugineum
TPR.G32142 Trifolium pratense
TWI23G1150 Tripterygium wilfordii
unitig_0.g1343 Utricularia gibba
vmacro13505 Vaccinium macrocarpon
VMungo0331G0733 Vigna mungo
Zm00001eb427880 Zea mays

User provided reference genes

Program Settings