Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia10044 Actinidia chinensis
Actinidia20887 Actinidia chinensis
Aqoxy7G00256 Aquilegia oxysepala
Atru.chr5.528 Acer truncatum
CAN.G2424.1 Capsicum annuum
CAN.G342.1 Capsicum annuum
CAN.G526.2 Capsicum annuum
CAN.G650.25 Capsicum annuum
CAN.G650.28 Capsicum annuum
CAN.G650.32 Capsicum annuum
CAN.G650.35 Capsicum annuum
CANSAT56G2487 Cannabis sativa
Ca_23604_v3 Cicer arietinum L.
Cc02_g38320 Coffea canephora
CDE02G1832 Ceratophyllum demersum
CDE06G1281 Ceratophyllum demersum
CDE10G0666 Ceratophyllum demersum
Cfa003895 Carpinus fangiana
Ciclev10021525m.g Citrus clementina
CiPaw.01G064000 Carya illinoinensis
CiPaw.02G033200 Carya illinoinensis
ClCG06G003540 Citrullus lanatus
COL.COLO4_12739 Corchorus olitorius
Cpa.g.sc11.35 Carica papaya
Cpa.g.sc406.2 Carica papaya
CsaV3_6G000720 Cucumis sativus L.
CSS0004449 Camellia sinensis var. sinensis
DCAR_015699 Daucus carota
DCAR_015701 Daucus carota
Dinv32502 Davidia involucrata
Dinv43841 Davidia involucrata
Duzib133G0920 Durio zibethinus
Duzib138G0695 Durio zibethinus
ECA233G1044 Erigeron canadensis
Eucgr.I00992 Eucalyptus grandis
FAN01G0301 Fragaria x ananassa
FAN01G2602 Fragaria x ananassa
FAN03G0040 Fragaria x ananassa
FAN03G1311 Fragaria x ananassa
FAN03G1905 Fragaria x ananassa
FAN03G2349 Fragaria x ananassa
FAN06G0140 Fragaria x ananassa
FAN06G0921 Fragaria x ananassa
FAN06G3127 Fragaria x ananassa
FAN06G3406 Fragaria x ananassa
FAN06G4353 Fragaria x ananassa
FAN10G0914 Fragaria x ananassa
FAN10G1634 Fragaria x ananassa
FAN10G3360 Fragaria x ananassa
FAN10G3545 Fragaria x ananassa
FAN10G3557 Fragaria x ananassa
FAN10G3829 Fragaria x ananassa
FvH4_7g14870 Fragaria vesca
FvH4_7g14880 Fragaria vesca
FvH4_7g14980 Fragaria vesca
Glyma.07G068200 Glycine max
Glyma.16G034200 Glycine max
Gohir.A08G131933 Gossypium hirsutum
Gohir.A11G090700 Gossypium hirsutum
Gohir.D08G153300 Gossypium hirsutum
Gohir.D11G095300 Gossypium hirsutum
Gorai.004G159200 Gossypium raimondii
Gorai.007G101600 Gossypium raimondii
GSVIVG01026998001 Vitis vinifera
HanXRQChr16g0521871 Helianthus annuus
Haze_15537 Corylus avellana
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla
Lalb_Chr17g0339411 Lupinus albus
Lj3g0021957 Lotus japonicus
Lsat_1_v5_gn_7_4060 Lactuca sativa
Lsat_1_v5_gn_7_4100 Lactuca sativa
Manes.01G254700 Manihot esculenta
Manes.05G031900 Manihot esculenta
MD01G1067400 Malus domestica
MD07G1133500 Malus domestica
Medtr3g015950 Medicago truncatula
Medtr8g028835 Medicago truncatula
Medtr8g028845 Medicago truncatula
Medtr8g028870 Medicago truncatula
MELO3C021196.2 Cucumis melo
Migut.D00457 Erythranthe guttata
MSTRG.12522 Avicennia marina
MSTRG.18339 Avicennia marina
Nitab4.5_0001040g0020 Nicotiana tabacum
Nitab4.5_0001655g0110 Nicotiana tabacum
Nitab4.5_0002749g0010 Nicotiana tabacum
Nitab4.5_0003369g0030 Nicotiana tabacum
Nn1g01591 Nelumbo nucifera
Oeu035722.1 Olea europaea
Oeu035728.1 Olea europaea
Oeu035731.1 Olea europaea
Oeu039028.1 Olea europaea
Oeu055797.1 Olea europaea
PGR042G0313 Punica granatum
PGSC0003DMG400008290 Solanum tuberosum
Phvul.010G101000 Phaseolus vulgaris
Potri.002G161700 Populus trichocarpa
Potri.014G087500 Populus trichocarpa
Potri.014G099800 Populus trichocarpa
Prupe.2G173800 Prunus persica
QL04p054168 Quercus lobata
RcHm_v2.0_Chr1g0357021 Rosa chinensis
Rhsim01G0164000 Rhododendron simsii
Rhsim01G0164400 Rhododendron simsii
Rhsim06G0236200 Rhododendron simsii
Sabra02G0128600 Salix brachista
Sabra14G0063500 Salix brachista
Sabra14G0073200 Salix brachista
SalBow6G3791 Salvia bowleyana
Sc01g0003550 Simmondsia chinensis
Sc01g0003560 Simmondsia chinensis
Sed0018743 Sechium edule
SGA_v2.0_scaffold1G00635 Striga asiatica
Solyc02g070700.3 Solanum lycopersicum
Sopen02g019780 Solanum pennellii
TAR629G3314 Trochodendron aralioides
Thecc.01G356100 Theobroma cacao
TPR.G17916 Trifolium pratense
TWI14G1134 Tripterygium wilfordii
TWI23G0998 Tripterygium wilfordii
unitig_22.g5289 Utricularia gibba
unitig_8.g3737 Utricularia gibba
vmacro20912 Vaccinium macrocarpon
vmacro20913 Vaccinium macrocarpon
VMungo0331G0061 Vigna mungo

User provided reference genes

Program Settings