Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29370 Brassica napus
Aa31LG2G9860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis
Actinidia24004 Actinidia chinensis
Ah.01g010100 Amaranthus hybridus
AL2G16000 Arabidopsis lyrata
Aqoxy5G01924 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea
AT1G60600 Arabidopsis thaliana
ATR0782G112 Amborella trichopoda
ATR0918G004 Amborella trichopoda
Atru.chr6.1184 Acer truncatum
AUR62010160 Chenopodium quinoa
AUR62013159 Chenopodium quinoa
BcaB04g20275 Brassica carinata
BcaC09g49390 Brassica carinata
BolC1t03681H Brassica oleracea
BraA01t03071Z Brassica rapa
C01p37160 Brassica napus
CAN.G523.45 Capsicum annuum
CANSAT21G1086 Cannabis sativa
CARHR052370 Cardamine hirsuta
Carub.0002s0473 Capsella rubella
CBR_g45392 Chara braunii
Cc02_g21250 Coffea canephora
Ciclev10028615m.g Citrus clementina
CiPaw.05G033400 Carya illinoinensis
ClCG09G015650 Citrullus lanatus
COL.COLO4_32304 Corchorus olitorius
Cpa.g.sc42.26 Carica papaya
Cre04.g219787 Chlamydomonas reinhardtii
CsaV3_7G006740 Cucumis sativus L.
CSS0025541 Camellia sinensis var. sinensis
CSS0034348 Camellia sinensis var. sinensis
DCAR_003711 Daucus carota
Dinv24174 Davidia involucrata
Duzib052G0010 Durio zibethinus
ECA234G3624 Erigeron canadensis
EL10Ac9g21517 Beta vulgaris
Eucgr.G00932 Eucalyptus grandis
Eucgr.G00935 Eucalyptus grandis
FAN02G0548 Fragaria x ananassa
FAN09G1871 Fragaria x ananassa
FvH4_6g33511 Fragaria vesca
Glyma.08G070600 Glycine max
Glyma.10G123801 Glycine max
Glyma.13G042800 Glycine max
Glyma.16G064700 Glycine max
Gohir.A03G175100 Gossypium hirsutum
Gohir.D02G198600 Gossypium hirsutum
Gorai.005G222500 Gossypium raimondii
GSVIVG01015772001 Vitis vinifera
HanXRQChr10g0303621 Helianthus annuus
Haze_10585 Corylus avellana
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla
HPP92_019303 Vanilla planifolia
Hund06370 Selenicereus undatus
Lalb_Chr05g0217591 Lupinus albus
Lj4g0023834 Lotus japonicus
Lj9A350G66 Lonicera japonica
Lsat_1_v5_gn_5_108680 Lactuca sativa
Manes.07G034700 Manihot esculenta
Mapoly0112s0045 Marchantia polymorpha
MBI05_g05612_MAGBIO Magnolia biondii
MD10G1052500 Malus domestica
Medtr4g094100 Medicago truncatula
MELO3C018621.2 Cucumis melo
Migut.B00584 Erythranthe guttata
Migut.B01155 Erythranthe guttata
Migut.B01157 Erythranthe guttata
MSTRG.16600 Avicennia marina
MSTRG.20291 Avicennia marina
Nitab4.5_0000863g0140 Nicotiana tabacum
Nitab4.5_0003959g0010 Nicotiana tabacum
Nn5g30026 Nelumbo nucifera
Oeu000253.3 Olea europaea
Oeu042410.2 Olea europaea
Os03g0190100 Oryza sativa ssp. japonica
Peaxi162Scf01060g00128 Petunia axillaris
PGR042G1699 Punica granatum
PGSC0003DMG400012575 Solanum tuberosum
Phvul.002G210750 Phaseolus vulgaris
Potri.001G311400 Populus trichocarpa
Potri.017G050900 Populus trichocarpa
Pp3c15_22700 Physcomitrium patens
PRCOL_00002739 Prasinoderma coloniale
Prupe.8G064500 Prunus persica
Psat7g100320 Pisum sativum
PSO210G1371 Papaver somniferum
PSO447G0017 Papaver somniferum
QL11p022738 Quercus lobata
QL11p022820 Quercus lobata
RcHm_v2.0_Chr2g0143381 Rosa chinensis
Rhsim11G0137800 Rhododendron simsii
RhsimUnG0187900 Rhododendron simsii
Sabra17G0037300 Salix brachista
Sabra17G0037900 Salix brachista
Sabra17G0042600 Salix brachista
SalBow5G5605 Salvia bowleyana
Sc15g0003050 Simmondsia chinensis
Sed0004067 Sechium edule
SEGI_15059 Sequoiadendron giganteum
SEGI_15165 Sequoiadendron giganteum
SGA_v2.0_scaffold83G26327 Striga asiatica
SMO364G0259 Selaginella moellendorffii
Solyc01g105460.4 Solanum lycopersicum
Sopen01g047960 Solanum pennellii
SpUN0430_0010 Schrenkiella parvula
TAR628G1271 Trochodendron aralioides
THA.LOC104799883 Tarenaya hassleriana
Thecc.02G134500 Theobroma cacao
Thhalv10023528m.g Eutrema salsugineum
TPR.G35344 Trifolium pratense
TWI23G0792 Tripterygium wilfordii
unitig_0.g609 Utricularia gibba
vmacro01839 Vaccinium macrocarpon
VMungo0251G1514 Vigna mungo
Zm00001eb006830 Zea mays

User provided reference genes

Program Settings