Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p15870 Brassica napus
Aa31LG7G15600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis
Actinidia00608 Actinidia chinensis
Actinidia20496 Actinidia chinensis
Actinidia20497 Actinidia chinensis
Ah.01g008830 Amaranthus hybridus
AL4G10160 Arabidopsis lyrata
Aqoxy5G01641 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UTA44Z Arachis hypogaea
AT2G21070 Arabidopsis thaliana
ATR0810G159 Amborella trichopoda
Atru.chr5.3221 Acer truncatum
Atru.chr5.3222 Acer truncatum
Atru.chr5.3271 Acer truncatum
Atru.chr5.3277 Acer truncatum
AUR62010072 Chenopodium quinoa
BcaB06g27766 Brassica carinata
BolC4t26628H Brassica oleracea
BraA04t17219Z Brassica rapa
C04p50300 Brassica napus
CAN.G134.236 Capsicum annuum
CANSAT25G3024 Cannabis sativa
CARHR111910 Cardamine hirsuta
Carub.0003s3491 Capsella rubella
Carub.0004s0010 Capsella rubella
Ca_18241_v3 Cicer arietinum L.
Ca_18243_v3 Cicer arietinum L.
CBR_g23939 Chara braunii
Cc06_g16120 Coffea canephora
CDE05G1540 Ceratophyllum demersum
Ciclev10028267m.g Citrus clementina
CiPaw.06G124100 Carya illinoinensis
ClCG02G004230 Citrullus lanatus
COL.COLO4_17179 Corchorus olitorius
COL.COLO4_17298 Corchorus olitorius
Cpa.g.sc37.173 Carica papaya
Cre01.g044150 Chlamydomonas reinhardtii
CsaV3_7G000880 Cucumis sativus L.
CSS0004411 Camellia sinensis var. sinensis
Dinv04950 Davidia involucrata
Dinv39489 Davidia involucrata
Duzib132G0346 Durio zibethinus
ECA233G1460 Erigeron canadensis
EL10Ac9g21414 Beta vulgaris
Eucgr.G01768 Eucalyptus grandis
FAN07G1625 Fragaria x ananassa
FAN07G2354 Fragaria x ananassa
FAN20G2467 Fragaria x ananassa
FAN24G0408 Fragaria x ananassa
FvH4_2g01620 Fragaria vesca
Glyma.05G133200 Glycine max
Glyma.08G087700 Glycine max
Gohir.A12G038400 Gossypium hirsutum
Gohir.D12G033900 Gossypium hirsutum
Gorai.008G034900 Gossypium raimondii
GSVIVG01024058001 Vitis vinifera
HanXRQChr17g0553851 Helianthus annuus
Haze_02174 Corylus avellana
Haze_02181 Corylus avellana
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla
HPP92_014019 Vanilla planifolia
Hund06416 Selenicereus undatus
Lalb_Chr13g0293551 Lupinus albus
Lj4g0012983 Lotus japonicus
Lj5A183G92 Lonicera japonica
Lsat_1_v5_gn_8_124961 Lactuca sativa
Manes.11G082657 Manihot esculenta
Mapoly0085s0033 Marchantia polymorpha
MBI02_g27965_MAGBIO Magnolia biondii
MCO01G168 Micromonas commoda
MD05G1118100 Malus domestica
MD10G1121100 Malus domestica
MELO3C013369.2 Cucumis melo
Migut.B00102 Erythranthe guttata
MSTRG.16892 Avicennia marina
Nitab4.5_0001423g0020 Nicotiana tabacum
Nitab4.5_0001903g0070 Nicotiana tabacum
Nitab4.5_0008354g0020 Nicotiana tabacum
Nn7g37263 Nelumbo nucifera
Oeu006673.1 Olea europaea
Oeu020247.1 Olea europaea
Oeu063293.1 Olea europaea
Os02g0121200 Oryza sativa ssp. japonica
Peaxi162Scf00434g00625 Petunia axillaris
PGR042G0052 Punica granatum
PGSC0003DMG401028564 Solanum tuberosum
PGSC0003DMG402028564 Solanum tuberosum
Phvul.002G189600 Phaseolus vulgaris
Potri.004G172100 Populus trichocarpa
Potri.009G131700 Populus trichocarpa
Pp3c8_21040 Physcomitrium patens
PRCOL_00006207 Prasinoderma coloniale
Prupe.8G162700 Prunus persica
Psat7g085760 Pisum sativum
QL11p048584 Quercus lobata
QL11p049167 Quercus lobata
RcHm_v2.0_Chr6g0244411 Rosa chinensis
RcHm_v2.0_Chr6g0244441 Rosa chinensis
Rhsim11G0190600 Rhododendron simsii
Sabra04G0114400 Salix brachista
Sabra09G0102100 Salix brachista
SalBow1G4312 Salvia bowleyana
Sc08g0003080 Simmondsia chinensis
Sed0009186 Sechium edule
SEGI_13829 Sequoiadendron giganteum
SEGI_22420 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20406 Striga asiatica
SHI05717 Sapria himalayana
SMO169G0079 Selaginella moellendorffii
Solyc01g098460.4 Solanum lycopersicum
Sopen01g042030 Solanum pennellii
Sp4g00210 Schrenkiella parvula
TAR381G0106 Trochodendron aralioides
THA.LOC104807791 Tarenaya hassleriana
Thecc.02G064100 Theobroma cacao
Thhalv10000146m.g Eutrema salsugineum
TPR.G31245 Trifolium pratense
TWI53G1223 Tripterygium wilfordii
unitig_60.g25823 Utricularia gibba
vmacro02264 Vaccinium macrocarpon
VMungo0251G3227 Vigna mungo
Zm00001eb208320 Zea mays

User provided reference genes

Program Settings