Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia16863 Actinidia chinensis
Actinidia35518 Actinidia chinensis
Ah.06g195990 Amaranthus hybridus
Aqoxy2G02721 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.31L8TN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.35WTTC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9H9EE5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7QP4L Arachis hypogaea
ATR0693G206 Amborella trichopoda
Atru.chr2.357 Acer truncatum
AUR62000387 Chenopodium quinoa
AUR62006742 Chenopodium quinoa
CAN.G1076.21 Capsicum annuum
CANSAT54G2981 Cannabis sativa
Ca_10176_v3 Cicer arietinum L.
Cc02_g35160 Coffea canephora
CDE02G0367 Ceratophyllum demersum
CDE08G0055 Ceratophyllum demersum
Cfa006707 Carpinus fangiana
Ciclev10000538m.g Citrus clementina
CiPaw.07G030100 Carya illinoinensis
CiPaw.08G154900 Carya illinoinensis
ClCG02G014860 Citrullus lanatus
COL.COLO4_05545 Corchorus olitorius
Cpa.g.sc48.167 Carica papaya
CsaV3_2G007150 Cucumis sativus L.
CSS0010691 Camellia sinensis var. sinensis
DCAR_025287 Daucus carota
DCAR_029344 Daucus carota
Dinv24462 Davidia involucrata
Dinv24463 Davidia involucrata
Dinv30898 Davidia involucrata
Duzib128G1170 Durio zibethinus
Duzib177G0712 Durio zibethinus
ECA169G0006 Erigeron canadensis
ECA246G2180 Erigeron canadensis
EL10Ac4g09463 Beta vulgaris
Eucgr.H03294 Eucalyptus grandis
FAN02G1774 Fragaria x ananassa
FAN05G4753 Fragaria x ananassa
FAN09G1774 Fragaria x ananassa
FAN14G3207 Fragaria x ananassa
FvH4_6g07501 Fragaria vesca
Glyma.03G231000 Glycine max
Glyma.10G146700 Glycine max
Glyma.19G228200 Glycine max
Glyma.20G096700 Glycine max
Gohir.A08G205400 Gossypium hirsutum
Gohir.A11G274100 Gossypium hirsutum
Gohir.D08G222500 Gossypium hirsutum
Gohir.D11G284300 Gossypium hirsutum
Gorai.004G236300 Gossypium raimondii
Gorai.007G307200 Gossypium raimondii
GSVIVG01031248001 Vitis vinifera
HanXRQChr11g0324231 Helianthus annuus
Haze_04056 Corylus avellana
Hma1.2p1_0008F-1.1_g005560 Hydrangea macrophylla
HPP92_005420 Vanilla planifolia
Hund07311 Selenicereus undatus
Lalb_Chr02g0147781 Lupinus albus
Lj5C328T5 Lonicera japonica
Lj5g0007706 Lotus japonicus
Lju926C5T2 Lonicera japonica
Lsat_1_v5_gn_5_40480 Lactuca sativa
Manes.09G177400 Manihot esculenta
MBI18_g03639_MAGBIO Magnolia biondii
MBI18_g32031_MAGBIO Magnolia biondii
MBI19_g03242_MAGBIO Magnolia biondii
MD00G1208300 Malus domestica
MD12G1205300 Malus domestica
Medtr1g084120 Medicago truncatula
Medtr4g071265 Medicago truncatula
Medtr4g071285 Medicago truncatula
MELO3C004178.2 Cucumis melo
Migut.N00937 Erythranthe guttata
MSTRG.27937 Avicennia marina
MSTRG.27938 Avicennia marina
Nitab4.5_0001338g0100 Nicotiana tabacum
Nitab4.5_0004525g0020 Nicotiana tabacum
Nn3g21728 Nelumbo nucifera
Oeu052936.1 Olea europaea
Oeu053742.1 Olea europaea
Os01g0300900 Oryza sativa ssp. japonica
Peaxi162Scf01061g00014 Petunia axillaris
PGR031G1700 Punica granatum
PGSC0003DMG400002763 Solanum tuberosum
Phvul.001G224800 Phaseolus vulgaris
Phvul.007G201700 Phaseolus vulgaris
Potri.005G013000 Populus trichocarpa
Potri.013G008200 Populus trichocarpa
Prupe.6G312400 Prunus persica
Psat6g152600 Pisum sativum
PSO210G6591 Papaver somniferum
PSO541G0443 Papaver somniferum
PSO761G0363 Papaver somniferum
QL03p014074 Quercus lobata
RcHm_v2.0_Chr3g0457201 Rosa chinensis
Rhsim11G0096500 Rhododendron simsii
Sabra05G0009200 Salix brachista
Sabra05G0020800 Salix brachista
Sabra05G0020900 Salix brachista
Sabra05G0021400 Salix brachista
Sabra05G0022400 Salix brachista
Sabra13G0006900 Salix brachista
SalBow3G0642 Salvia bowleyana
Sc16g0009070 Simmondsia chinensis
Sed0011043 Sechium edule
Sed0017369 Sechium edule
SGA_v2.0_scaffold5G02892 Striga asiatica
SMO115G0101 Selaginella moellendorffii
Solyc01g100600.4 Solanum lycopersicum
Sopen01g044100 Solanum pennellii
TAR362G0132 Trochodendron aralioides
TAR633G1326 Trochodendron aralioides
THA.LOC104816894 Tarenaya hassleriana
THA.LOC104824492 Tarenaya hassleriana
Thecc.05G323700 Theobroma cacao
TPR.G2586 Trifolium pratense
TWI36G0703 Tripterygium wilfordii
unitig_52.g17414 Utricularia gibba
vmacro01568 Vaccinium macrocarpon
VMungo0720G2454 Vigna mungo
VMungo1383G0056 Vigna mungo
Zm00001eb130130 Zea mays
Zm00001eb340330 Zea mays

User provided reference genes

Program Settings