Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05340 Brassica napus
Aa31LG1G6220 Aethionema arabicum
Actinidia06233 Actinidia chinensis
Actinidia10154 Actinidia chinensis
Ah.12g062770 Amaranthus hybridus
AL1G18730 Arabidopsis lyrata
Aqoxy1G00369 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.XVKA12 Arachis hypogaea
AT1G08315 Arabidopsis thaliana
ATR0745G013 Amborella trichopoda
Atru.chr12.1255 Acer truncatum
AUR62026882 Chenopodium quinoa
BcaB07g34077 Brassica carinata
BolC5t29405H Brassica oleracea
BolC5t29407H Brassica oleracea
BraA06t23743Z Brassica rapa
C05p06440 Brassica napus
C05p06470 Brassica napus
CAN.G1045.21 Capsicum annuum
CARHR008200 Cardamine hirsuta
Carub.0001s0767 Capsella rubella
Ca_05571_v3 Cicer arietinum L.
Ca_23967_v3 Cicer arietinum L.
Cc02_g29680 Coffea canephora
Cfa010924 Carpinus fangiana
Ciclev10021235m.g Citrus clementina
CiPaw.13G014600 Carya illinoinensis
CiPaw.14G008300 Carya illinoinensis
ClCG08G010670 Citrullus lanatus
COL.COLO4_20675 Corchorus olitorius
Cpa.g.c43157 Carica papaya
CsaV3_6G035860 Cucumis sativus L.
CSS0012434 Camellia sinensis var. sinensis
CSS0026304 Camellia sinensis var. sinensis
CSS0033972 Camellia sinensis var. sinensis
DCAR_003626 Daucus carota
Dinv32021 Davidia involucrata
Dinv44690 Davidia involucrata
Duzib114G0257 Durio zibethinus
Duzib128G1584 Durio zibethinus
ECA248G3412 Erigeron canadensis
Eucgr.G03226 Eucalyptus grandis
FAN03G0755 Fragaria x ananassa
FAN06G4797 Fragaria x ananassa
FAN10G1196 Fragaria x ananassa
FvH4_7g03360 Fragaria vesca
Glyma.04G135700 Glycine max
Glyma.13G195900 Glycine max
Glyma.15G234200 Glycine max
Gohir.A05G282300 Gossypium hirsutum
Gohir.A10G186200 Gossypium hirsutum
Gohir.D05G283500 Gossypium hirsutum
Gohir.D10G193200 Gossypium hirsutum
Gorai.009G298000 Gossypium raimondii
Gorai.011G216000 Gossypium raimondii
GSVIVG01036669001 Vitis vinifera
HanXRQChr04g0112891 Helianthus annuus
Haze_03018 Corylus avellana
Haze_03025 Corylus avellana
Hma1.2p1_0837F.1_g226010 Hydrangea macrophylla
Hma1.2p1_1202F.1_g266875 Hydrangea macrophylla
HPP92_006729 Vanilla planifolia
Lalb_Chr03g0032071 Lupinus albus
Lalb_Chr19g0133081 Lupinus albus
Lj3g0017268 Lotus japonicus
Lj8A90T48 Lonicera japonica
Lsat_1_v5_gn_7_31600 Lactuca sativa
Manes.11G006100 Manihot esculenta
MBI13_g38612_MAGBIO Magnolia biondii
MD02G1283700 Malus domestica
MD07G1049200 Malus domestica
Medtr8g039560 Medicago truncatula
MELO3C011394.2 Cucumis melo
Migut.B01237 Erythranthe guttata
MSTRG.20508 Avicennia marina
Nitab4.5_0003481g0060 Nicotiana tabacum
Nitab4.5_0005808g0050 Nicotiana tabacum
Nn1g08267 Nelumbo nucifera
Nn4g23826 Nelumbo nucifera
Nn7g36735 Nelumbo nucifera
Nn7g37904 Nelumbo nucifera
Os01g0956075 Oryza sativa ssp. japonica
Peaxi162Scf00082g00013 Petunia axillaris
PGR031G0010 Punica granatum
PGSC0003DMG400040483 Solanum tuberosum
Phvul.005G025800 Phaseolus vulgaris
Phvul.L001620 Phaseolus vulgaris
Potri.001G028300 Populus trichocarpa
Potri.003G195400 Populus trichocarpa
Pp3c26_8290 Physcomitrium patens
Prupe.2G038900 Prunus persica
Psat4g193800 Pisum sativum
PSO339G3787 Papaver somniferum
PSO384G1336 Papaver somniferum
QL04p017585 Quercus lobata
QL04p017594 Quercus lobata
RcHm_v2.0_Chr1g0325681 Rosa chinensis
Rhsim02G0057500 Rhododendron simsii
Rhsim07G0067600 Rhododendron simsii
Sabra01G0020600 Salix brachista
Sabra03G0145800 Salix brachista
SalBow5G1402 Salvia bowleyana
Sc10g0004450 Simmondsia chinensis
Sed0013519 Sechium edule
SEGI_16308 Sequoiadendron giganteum
SEGI_33417 Sequoiadendron giganteum
SGA_v2.0_scaffold124G33609 Striga asiatica
SMO118G0213 Selaginella moellendorffii
Solyc01g096460.2 Solanum lycopersicum
Sopen01g040190 Solanum pennellii
Sp1g06950 Schrenkiella parvula
TAR633G1700 Trochodendron aralioides
TAR636G1296 Trochodendron aralioides
THA.LOC104809822 Tarenaya hassleriana
Thecc.10G151000 Theobroma cacao
Thhalv10010031m.g Eutrema salsugineum
TWI38G1861 Tripterygium wilfordii
TWI63G1844 Tripterygium wilfordii
unitig_749.g14335 Utricularia gibba
unitig_749.g14336 Utricularia gibba
unitig_8.g3782 Utricularia gibba
vmacro13757 Vaccinium macrocarpon
VMungo1080G1396 Vigna mungo
VMungo1127G0668 Vigna mungo
Zm00001eb140580 Zea mays

User provided reference genes

Program Settings