Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p39000 Brassica napus
Aa31LG11G9810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2655 Anthoceros agrestis
Actinidia35517 Actinidia chinensis
Ah.03g134550 Amaranthus hybridus
AL6G38700 Arabidopsis lyrata
Aqoxy5G02944 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JG44AF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T92ZT6 Arachis hypogaea
AT5G26820 Arabidopsis thaliana
ATR0693G447 Amborella trichopoda
Atru.chr2.356 Acer truncatum
AUR62000385 Chenopodium quinoa
AUR62006741 Chenopodium quinoa
AUR62035215 Chenopodium quinoa
BcaC03g17830 Brassica carinata
BcaNung06218 Brassica carinata
BolC2t11920H Brassica oleracea
BraA02t08870Z Brassica rapa
C02p58590 Brassica napus
CAN.G1076.22 Capsicum annuum
CANSAT54G1309 Cannabis sativa
CARHR186710 Cardamine hirsuta
Carub.0006s2448 Capsella rubella
Ca_10177_v3 Cicer arietinum L.
CBR_g24322 Chara braunii
Cc02_g35170 Coffea canephora
CDE02G2949 Ceratophyllum demersum
CDE09G1129 Ceratophyllum demersum
Ciclev10000649m.g Citrus clementina
CiPaw.07G030200 Carya illinoinensis
ClCG02G014850 Citrullus lanatus
COL.COLO4_05544 Corchorus olitorius
Cpa.g.sc48.168 Carica papaya
CsaV3_2G007160 Cucumis sativus L.
CSS0010424 Camellia sinensis var. sinensis
DCAR_005423 Daucus carota
Dinv24464 Davidia involucrata
Dinv30899 Davidia involucrata
ECA232G4422 Erigeron canadensis
EL10Ac4g09464 Beta vulgaris
Eucgr.L00261 Eucalyptus grandis
FAN02G2852 Fragaria x ananassa
FAN09G0993 Fragaria x ananassa
FAN14G3073 Fragaria x ananassa
FvH4_6g07510 Fragaria vesca
Glyma.10G146600 Glycine max
Glyma.20G096402 Glycine max
Gohir.A08G205300 Gossypium hirsutum
Gohir.A13G112400 Gossypium hirsutum
Gohir.D08G222400 Gossypium hirsutum
Gohir.D13G115300 Gossypium hirsutum
Gorai.004G236200 Gossypium raimondii
Gorai.013G129700 Gossypium raimondii
GSVIVG01031249001 Vitis vinifera
HanXRQChr09g0258701 Helianthus annuus
HanXRQChr15g0486571 Helianthus annuus
Haze_04055 Corylus avellana
Hma1.2p1_0008F-1.1_g005550 Hydrangea macrophylla
HPP92_010606 Vanilla planifolia
Hund07310 Selenicereus undatus
Lalb_Chr02g0147761 Lupinus albus
Lalb_Chr02g0147771 Lupinus albus
Lalb_Chr06g0167461 Lupinus albus
Lj5C328G3 Lonicera japonica
Lj5g0023698 Lotus japonicus
Lsat_1_v5_gn_8_116121 Lactuca sativa
Manes.08G110700 Manihot esculenta
Mapoly0001s0146 Marchantia polymorpha
MBI19_g03243_MAGBIO Magnolia biondii
MD04G1193000 Malus domestica
MD12G1205200 Malus domestica
Medtr1g084140 Medicago truncatula
MELO3C004177.2 Cucumis melo
Migut.B00957 Erythranthe guttata
Nitab4.5_0001338g0110 Nicotiana tabacum
Nitab4.5_0004525g0030 Nicotiana tabacum
Nn3g21731 Nelumbo nucifera
Nn4g25566 Nelumbo nucifera
Oeu052934.2 Olea europaea
Os05g0131500 Oryza sativa ssp. japonica
Os12g0562100 Oryza sativa ssp. japonica
Peaxi162Scf01061g00122 Petunia axillaris
PGR083G2894 Punica granatum
PGSC0003DMG400002762 Solanum tuberosum
Phvul.007G201800 Phaseolus vulgaris
Potri.005G012900 Populus trichocarpa
Pp3c25_1200 Physcomitrium patens
Pp3c25_630 Physcomitrium patens
Pp3c5_21200 Physcomitrium patens
Prupe.6G312300 Prunus persica
Psat6g152760 Pisum sativum
PSO210G5840 Papaver somniferum
PSO761G0398 Papaver somniferum
QL03p014086 Quercus lobata
RcHm_v2.0_Chr3g0457221 Rosa chinensis
Rhsim11G0096400 Rhododendron simsii
Sabra05G0009100 Salix brachista
Sabra05G0020500 Salix brachista
SalBow3G0030 Salvia bowleyana
SalBow7G2322 Salvia bowleyana
Sc09g0002620 Simmondsia chinensis
Sed0024424 Sechium edule
Sed0025162 Sechium edule
SEGI_32498 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01972 Striga asiatica
SGA_v2.0_scaffold5G02894 Striga asiatica
SMO118G0422 Selaginella moellendorffii
Solyc01g100610.3 Solanum lycopersicum
Sopen01g044110 Solanum pennellii
Sp2g21170 Schrenkiella parvula
TAR362G0469 Trochodendron aralioides
THA.LOC104802775 Tarenaya hassleriana
THA.LOC104821740 Tarenaya hassleriana
Thecc.05G323900 Theobroma cacao
Thhalv10003867m.g Eutrema salsugineum
TPR.G2638 Trifolium pratense
TWI12G0276 Tripterygium wilfordii
TWI56G1055 Tripterygium wilfordii
unitig_8.g4946 Utricularia gibba
vmacro01569 Vaccinium macrocarpon
vmacro01570 Vaccinium macrocarpon
VMungo0720G2751 Vigna mungo
Zm00001eb028490 Zea mays
Zm00001eb354930 Zea mays

User provided reference genes

Program Settings