Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p22570 Brassica napus
Aa31LG4G13380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2113 Anthoceros agrestis
Actinidia27818 Actinidia chinensis
Ah.01g016210 Amaranthus hybridus
Ah.11g048000 Amaranthus hybridus
AL5G21500 Arabidopsis lyrata
AL8G10080 Arabidopsis lyrata
Aqoxy7G04150 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6DI6VD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YUGK7S Arachis hypogaea
AT3G43540 Arabidopsis thaliana
ATR0681G177 Amborella trichopoda
Atru.chr7.1812 Acer truncatum
AUR62008497 Chenopodium quinoa
AUR62021599 Chenopodium quinoa
BcaB01g01223 Brassica carinata
BcaC01g02096 Brassica carinata
BolC3t19114H Brassica oleracea
BraA06t25331Z Brassica rapa
C03p68560 Brassica napus
CAN.G22.30 Capsicum annuum
CANSAT25G0260 Cannabis sativa
CARHR098720 Cardamine hirsuta
Carub.0005s0929 Capsella rubella
Carub.0251s0001 Capsella rubella
Ca_13088_v3 Cicer arietinum L.
CBR_g30757 Chara braunii
Cc00_g23060 Coffea canephora
Cc00_g30770 Coffea canephora
Cc00_g35650 Coffea canephora
Cc08_g04510 Coffea canephora
Cc08_g04520 Coffea canephora
Cc08_g04540 Coffea canephora
Cc08_g04560 Coffea canephora
Cc08_g04580 Coffea canephora
CDE05G3418 Ceratophyllum demersum
CDE05G3496 Ceratophyllum demersum
Cfa017842 Carpinus fangiana
Ciclev10009629m.g Citrus clementina
Ciclev10010538m.g Citrus clementina
CiPaw.13G138600 Carya illinoinensis
ClCG05G015960 Citrullus lanatus
COL.COLO4_21171 Corchorus olitorius
Cpa.g.sc82.21 Carica papaya
Cre06.g278264 Chlamydomonas reinhardtii
CsaV3_4G036230 Cucumis sativus L.
CSS0028971 Camellia sinensis var. sinensis
CSS0044626 Camellia sinensis var. sinensis
DCAR_002185 Daucus carota
Dinv09419 Davidia involucrata
Dinv37442 Davidia involucrata
Duzib187G1166 Durio zibethinus
ECA240G3698 Erigeron canadensis
EL10Ac5g11099 Beta vulgaris
Eucgr.C03178 Eucalyptus grandis
FAN15G0772 Fragaria x ananassa
FAN27G0198 Fragaria x ananassa
FvH4_2g37050 Fragaria vesca
Glyma.06G258800 Glycine max
Glyma.17G220200 Glycine max
Gohir.A06G081300 Gossypium hirsutum
Gohir.D06G080900 Gossypium hirsutum
Gorai.010G094300 Gossypium raimondii
GSVIVG01035507001 Vitis vinifera
HanXRQChr03g0084651 Helianthus annuus
Haze_18366 Corylus avellana
Hma1.2p1_0262F.1_g105216 Hydrangea macrophylla
Hma1.2p1_1969F.1_g309520 Hydrangea macrophylla
HPP92_019279 Vanilla planifolia
HPP92_019316 Vanilla planifolia
HPP92_019317 Vanilla planifolia
Hund02606 Selenicereus undatus
Lalb_Chr24g0393711 Lupinus albus
Lj5g0013864 Lotus japonicus
Lj8C369G2 Lonicera japonica
Lsat_1_v5_gn_3_5840 Lactuca sativa
Lsat_1_v5_gn_6_25780 Lactuca sativa
Lsat_1_v5_gn_6_74301 Lactuca sativa
Manes.03G055500 Manihot esculenta
Mapoly0124s0049 Marchantia polymorpha
MBI13_g01670_MAGBIO Magnolia biondii
MD08G1047000 Malus domestica
Medtr1g014730 Medicago truncatula
MELO3C016932.2 Cucumis melo
Migut.A00484 Erythranthe guttata
MSTRG.11848 Avicennia marina
Nitab4.5_0008291g0020 Nicotiana tabacum
Nitab4.5_0008763g0010 Nicotiana tabacum
Nitab4.5_0024082g0010 Nicotiana tabacum
Nn6g35635 Nelumbo nucifera
Oeu047793.1 Olea europaea
Os09g0436900 Oryza sativa ssp. japonica
Peaxi162Scf00014g01816 Petunia axillaris
PGR044G0762 Punica granatum
PGSC0003DMG400020816 Solanum tuberosum
PGSC0003DMG400020818 Solanum tuberosum
Phvul.001G044100 Phaseolus vulgaris
Potri.006G217700 Populus trichocarpa
Pp3c1_38250 Physcomitrium patens
Prupe.1G401200 Prunus persica
Psat6g024200 Pisum sativum
PSO135G0459 Papaver somniferum
RcHm_v2.0_Chr6g0304731 Rosa chinensis
Rhsim03G0050100 Rhododendron simsii
Sabra06G0167900 Salix brachista
SalBow4G0695 Salvia bowleyana
Sc04g0003070 Simmondsia chinensis
Sed0027870 Sechium edule
SGA_v2.0_scaffold89G27365 Striga asiatica
SMO351G0262 Selaginella moellendorffii
Solyc08g075100.4 Solanum lycopersicum
Sopen08g023730 Solanum pennellii
Sp5g17620 Schrenkiella parvula
TAR624G1124 Trochodendron aralioides
TAR636G2611 Trochodendron aralioides
THA.LOC104799597 Tarenaya hassleriana
Thecc.09G066700 Theobroma cacao
Thhalv10002575m.g Eutrema salsugineum
TPR.G38941 Trifolium pratense
TWI32G0525 Tripterygium wilfordii
unitig_32.g10956 Utricularia gibba
vmacro07660 Vaccinium macrocarpon
VMungo0647G1288 Vigna mungo
Zm00001eb313900 Zea mays

User provided reference genes

Program Settings