Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p36030 Brassica napus
A09p67040 Brassica napus
Aa31LG1G7320 Aethionema arabicum
Actinidia04365 Actinidia chinensis
Ah.01g015700 Amaranthus hybridus
AL1G16330 Arabidopsis lyrata
Aqoxy1G02076 Aquilegia oxysepala
Aqoxy2G02728 Aquilegia oxysepala
Aqoxy3G00772 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DF2I7I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E7WT9K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IJ2KIS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7YMH3 Arachis hypogaea
AT1G06320 Arabidopsis thaliana
ATR0796G138 Amborella trichopoda
AUR62038933 Chenopodium quinoa
AUR62039006 Chenopodium quinoa
BcaB03g13422 Brassica carinata
BcaC07g36801 Brassica carinata
BcaC07g42071 Brassica carinata
BcaC07g42074 Brassica carinata
BolC8t47040H Brassica oleracea
BolC8t52656H Brassica oleracea
BraA08t35509Z Brassica rapa
BraA09t42038Z Brassica rapa
C08p02480 Brassica napus
C08p51300 Brassica napus
CANSAT64G2990 Cannabis sativa
CARHR005880 Cardamine hirsuta
Carub.0001s0568 Capsella rubella
Ca_18884_v3 Cicer arietinum L.
Cc05_g08270 Coffea canephora
Ciclev10016971m.g Citrus clementina
CiPaw.04G132900 Carya illinoinensis
ClCG02G017790 Citrullus lanatus
COL.COLO4_33572 Corchorus olitorius
COL.COLO4_34622 Corchorus olitorius
Cpa.g.sc209.36 Carica papaya
DCAR_013164 Daucus carota
Dinv15181 Davidia involucrata
Dinv15448 Davidia involucrata
Duzib147G1311 Durio zibethinus
ECA238G3583 Erigeron canadensis
ECA246G1597 Erigeron canadensis
EL10Ac3g05494 Beta vulgaris
Eucgr.K01124 Eucalyptus grandis
FAN02G3842 Fragaria x ananassa
FAN05G3171 Fragaria x ananassa
FAN05G4039 Fragaria x ananassa
FAN09G0462 Fragaria x ananassa
FAN14G0259 Fragaria x ananassa
FAN14G0983 Fragaria x ananassa
FAN21G0105 Fragaria x ananassa
FvH4_6g27220 Fragaria vesca
FvH4_6g27231 Fragaria vesca
Glyma.06G277900 Glycine max
Glyma.06G279000 Glycine max
Glyma.06G279800 Glycine max
Glyma.12G127400 Glycine max
Glyma.15G020200 Glycine max
Gohir.A09G001600 Gossypium hirsutum
Gohir.D09G001300 Gossypium hirsutum
Gorai.006G001500 Gossypium raimondii
GSVIVG01034999001 Vitis vinifera
HanXRQChr16g0530371 Helianthus annuus
Haze_13357 Corylus avellana
Hma1.2p1_0178F.1_g078870 Hydrangea macrophylla
Hund03123 Selenicereus undatus
Hund07816 Selenicereus undatus
Lalb_Chr01g0005971 Lupinus albus
Lj1A685T55 Lonicera japonica
Lj3g0002577 Lotus japonicus
Lsat_1_v5_gn_8_120600 Lactuca sativa
Manes.01G133300 Manihot esculenta
MD08G1181200 Malus domestica
MD09G1238400 Malus domestica
Medtr4g079460 Medicago truncatula
Medtr4g079810 Medicago truncatula
Migut.D02221 Erythranthe guttata
Nitab4.5_0000537g0060 Nicotiana tabacum
Nitab4.5_0008326g0020 Nicotiana tabacum
Nn4g25571 Nelumbo nucifera
Os03g0308600 Oryza sativa ssp. japonica
Os03g0308700 Oryza sativa ssp. japonica
Peaxi162Scf00384g00046 Petunia axillaris
PGR142G3040 Punica granatum
PGSC0003DMG400007858 Solanum tuberosum
Phvul.011G131000 Phaseolus vulgaris
Phvul.011G133000 Phaseolus vulgaris
Phvul.011G133700 Phaseolus vulgaris
Potri.005G202500 Populus trichocarpa
Potri.010G144600 Populus trichocarpa
Prupe.3G117900 Prunus persica
Prupe.3G121400 Prunus persica
Psat7g165440 Pisum sativum
Psat7g165600 Pisum sativum
PSO170G4547 Papaver somniferum
PSO357G0060 Papaver somniferum
QL08p041551 Quercus lobata
RcHm_v2.0_Chr2g0129291 Rosa chinensis
RcHm_v2.0_Chr2g0129301 Rosa chinensis
RcHm_v2.0_Chr2g0129361 Rosa chinensis
Sabra05G0153900 Salix brachista
Sc05g0006750 Simmondsia chinensis
Sed0026533 Sechium edule
SGA_v2.0_scaffold61G21143 Striga asiatica
SHI18965 Sapria himalayana
Solyc12g010850.1 Solanum lycopersicum
Sopen12g006210 Solanum pennellii
Sp1g05110 Schrenkiella parvula
TAR624G0615 Trochodendron aralioides
TAR626G0568 Trochodendron aralioides
TAR633G2592 Trochodendron aralioides
THA.LOC104816084 Tarenaya hassleriana
Thecc.01G149900 Theobroma cacao
Thecc.04G299900 Theobroma cacao
Thhalv10009758m.g Eutrema salsugineum
TPR.G28309 Trifolium pratense
TWI59G1087 Tripterygium wilfordii
unitig_46.g18233 Utricularia gibba
VMungo1127G1181 Vigna mungo
VMungo1127G1825 Vigna mungo
VMungo1215G2452 Vigna mungo
Zm00001eb014790 Zea mays
Zm00001eb014800 Zea mays

User provided reference genes

Program Settings