Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G29380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis
Actinidia01892 Actinidia chinensis
AL4G47550 Arabidopsis lyrata
Aqoxy1G02544 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea
AT2G47960 Arabidopsis thaliana
ATR0680G340 Amborella trichopoda
Atru.chr10.1933 Acer truncatum
Atru.chr10.1934 Acer truncatum
AUR62014792 Chenopodium quinoa
AUR62016979 Chenopodium quinoa
BcaB02g08727 Brassica carinata
BcaC02g12534 Brassica carinata
CAN.G413.15 Capsicum annuum
CANSAT35G2021 Cannabis sativa
CARHR143350 Cardamine hirsuta
Carub.0004s3069 Capsella rubella
Ca_18532_v3 Cicer arietinum L.
CBR_g24248 Chara braunii
Cc02_g13080 Coffea canephora
CDE02G4141 Ceratophyllum demersum
CDE08G0172 Ceratophyllum demersum
Cfa000416 Carpinus fangiana
Cfa022434 Carpinus fangiana
Ciclev10009862m.g Citrus clementina
Ciclev10015324m.g Citrus clementina
CiPaw.09G057500 Carya illinoinensis
ClCG03G005920 Citrullus lanatus
COL.COLO4_31500 Corchorus olitorius
Cpa.g.sc27.66 Carica papaya
Cpa.g.sc777.3 Carica papaya
CsaV3_1G012160 Cucumis sativus L.
CSS0022240 Camellia sinensis var. sinensis
DCAR_004087 Daucus carota
Dinv07538 Davidia involucrata
Duzib160G0593 Durio zibethinus
Duzib192G0908 Durio zibethinus
Duzib235G1125 Durio zibethinus
ECA236G3091 Erigeron canadensis
ECA248G3961 Erigeron canadensis
EL10Ac8g20347 Beta vulgaris
Eucgr.D00641 Eucalyptus grandis
FAN09G2993 Fragaria x ananassa
FAN16G1437 Fragaria x ananassa
FvH4_3g04870 Fragaria vesca
Glyma.07G195200 Glycine max
Glyma.13G181100 Glycine max
Gohir.A06G126100 Gossypium hirsutum
Gohir.A10G024200 Gossypium hirsutum
Gohir.A10G024325 Gossypium hirsutum
Gohir.A10G024350 Gossypium hirsutum
Gohir.D06G130900 Gossypium hirsutum
Gohir.D10G024900 Gossypium hirsutum
Gorai.010G152800 Gossypium raimondii
Gorai.011G026200 Gossypium raimondii
GSVIVG01002030001 Vitis vinifera
HanXRQChr01g0003951 Helianthus annuus
HanXRQChr04g0124141 Helianthus annuus
Haze_06500 Corylus avellana
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla
HPP92_001753 Vanilla planifolia
Hund21245 Selenicereus undatus
Lalb_Chr16g0383661 Lupinus albus
Lj1C1207T6 Lonicera japonica
Lj4g0020818 Lotus japonicus
Lsat_1_v5_gn_1_127821 Lactuca sativa
Lsat_1_v5_gn_7_19001 Lactuca sativa
Manes.16G025600 Manihot esculenta
Mapoly0122s0006 Marchantia polymorpha
MBI17_g03748_MAGBIO Magnolia biondii
MD05G1316100 Malus domestica
MD10G1296600 Malus domestica
Medtr2g027310 Medicago truncatula
Medtr4g088960 Medicago truncatula
MELO3C002589.2 Cucumis melo
Migut.H01511 Erythranthe guttata
MSTRG.13186 Avicennia marina
Nitab4.5_0003942g0020 Nicotiana tabacum
Nitab4.5_0009738g0010 Nicotiana tabacum
Nitab4.5_0009738g0020 Nicotiana tabacum
Nitab4.5_0009738g0030 Nicotiana tabacum
Nn1g04020 Nelumbo nucifera
Nn6g34413 Nelumbo nucifera
Oeu053924.1 Olea europaea
Os10g0498800 Oryza sativa ssp. japonica
Peaxi162Scf00530g00823 Petunia axillaris
PGR004G2698 Punica granatum
PGSC0003DMG400022831 Solanum tuberosum
Phvul.002G227700 Phaseolus vulgaris
Potri.004G040500 Populus trichocarpa
Pp3c1_28670 Physcomitrium patens
PRCOL_00003805 Prasinoderma coloniale
Prupe.4G044000 Prunus persica
Psat7g112800 Pisum sativum
PSO017G7020 Papaver somniferum
PSO063G3883 Papaver somniferum
PSO170G5489 Papaver somniferum
PSO782G1256 Papaver somniferum
QL05p039635 Quercus lobata
RcHm_v2.0_Chr5g0008031 Rosa chinensis
Sabra04G0025000 Salix brachista
Sc24g0000810 Simmondsia chinensis
Sed0003237 Sechium edule
SGA_v2.0_scaffold49G18281 Striga asiatica
SHI01800 Sapria himalayana
SMO364G0067 Selaginella moellendorffii
SMO364G0571 Selaginella moellendorffii
Solyc10g008990.4 Solanum lycopersicum
Sopen10g004770 Solanum pennellii
Sp4g29880 Schrenkiella parvula
TAR629G2846 Trochodendron aralioides
THA.LOC104817534 Tarenaya hassleriana
Thecc.06G190700 Theobroma cacao
Thhalv10018568m.g Eutrema salsugineum
TPR.G12057 Trifolium pratense
TPR.G24681 Trifolium pratense
TPR.G32042 Trifolium pratense
TWI38G1702 Tripterygium wilfordii
TWI63G1670 Tripterygium wilfordii
unitig_8.g3355 Utricularia gibba
VMungo0251G1219 Vigna mungo
Zm00001eb044550 Zea mays

User provided reference genes

Program Settings