Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p28040 Brassica napus
Aa31LG3G17820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1808 Anthoceros agrestis
Actinidia16518 Actinidia chinensis
Ah.06g188590 Amaranthus hybridus
AL6G19490 Arabidopsis lyrata
Aqoxy6G00239 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9C2QS4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GTTL2Q Arachis hypogaea
AT5G08740 Arabidopsis thaliana
ATR0665G153 Amborella trichopoda
Atru.BG.96.p Acer truncatum
Atru.chr4.1109 Acer truncatum
AUR62000551 Chenopodium quinoa
AUR62006903 Chenopodium quinoa
AUR62038683 Chenopodium quinoa
BcaB08g37229 Brassica carinata
BolC9t59572H Brassica oleracea
BraA10t44853Z Brassica rapa
C09p68240 Brassica napus
CAN.G11.28 Capsicum annuum
CANSAT01G2335 Cannabis sativa
CARHR204260 Cardamine hirsuta
Carub.0006s0771 Capsella rubella
Ca_17611_v3 Cicer arietinum L.
Cc04_g15570 Coffea canephora
Cc07_g19500 Coffea canephora
CDE05G3097 Ceratophyllum demersum
Cfa002168 Carpinus fangiana
Cfa002176 Carpinus fangiana
Ciclev10000807m.g Citrus clementina
CiPaw.03G115600 Carya illinoinensis
ClCG04G001810 Citrullus lanatus
COL.COLO4_12111 Corchorus olitorius
Cpa.g.sc37.37 Carica papaya
Cre16.g671000 Chlamydomonas reinhardtii
CsaV3_4G030790 Cucumis sativus L.
CSS0012546 Camellia sinensis var. sinensis
CSS0035477 Camellia sinensis var. sinensis
CSS0039381 Camellia sinensis var. sinensis
CSS0043984 Camellia sinensis var. sinensis
DCAR_006357 Daucus carota
DCAR_013180 Daucus carota
Dinv30329 Davidia involucrata
Duzib264G0015 Durio zibethinus
ECA248G1760 Erigeron canadensis
EL10Ac4g09668 Beta vulgaris
Eucgr.H05078 Eucalyptus grandis
FAN04G0432 Fragaria x ananassa
FAN13G1065 Fragaria x ananassa
FAN18G4276 Fragaria x ananassa
FvH4_5g00410 Fragaria vesca
Glyma.05G195400 Glycine max
Glyma.08G002967 Glycine max
Glyma.08G003033 Glycine max
Gohir.A12G001900 Gossypium hirsutum
Gohir.D12G001700 Gossypium hirsutum
Gorai.008G001100 Gossypium raimondii
GSVIVG01022367001 Vitis vinifera
HanXRQChr01g0017771 Helianthus annuus
Haze_25343 Corylus avellana
Hma1.2p1_2302F.1_g319320 Hydrangea macrophylla
HPP92_013148 Vanilla planifolia
Hund07213 Selenicereus undatus
Lalb_Chr12g0202951 Lupinus albus
Lj4A830T32 Lonicera japonica
Lj4A830T33 Lonicera japonica
Lj4C830T4 Lonicera japonica
Lj4g0002141 Lotus japonicus
Lsat_1_v5_gn_1_80860 Lactuca sativa
Lsat_1_v5_gn_1_81581 Lactuca sativa
Manes.10G075600 Manihot esculenta
Mapoly0183s0011 Marchantia polymorpha
MBI06_g01071_MAGBIO Magnolia biondii
MCO15G677 Micromonas commoda
MD04G1081700 Malus domestica
Medtr8g094730 Medicago truncatula
MELO3C008946.2 Cucumis melo
Migut.L00271 Erythranthe guttata
Migut.L00582 Erythranthe guttata
MSTRG.3598 Avicennia marina
Nitab4.5_0002100g0110 Nicotiana tabacum
Nitab4.5_0004338g0140 Nicotiana tabacum
Nn5g28340 Nelumbo nucifera
Nn5g28377 Nelumbo nucifera
Oeu042319.1 Olea europaea
Oeu050103.1 Olea europaea
Os06g0214900 Oryza sativa ssp. japonica
Peaxi162Scf00699g00515 Petunia axillaris
PGR102G1699 Punica granatum
PGSC0003DMG400016687 Solanum tuberosum
Phvul.002G275600 Phaseolus vulgaris
Potri.007G098700 Populus trichocarpa
Pp3c24_18540 Physcomitrium patens
PRCOL_00002259 Prasinoderma coloniale
Prupe.5G076700 Prunus persica
Psat1g031680 Pisum sativum
Psat7g043600 Pisum sativum
PSO170G3731 Papaver somniferum
PSO528G0231 Papaver somniferum
QL10p040044 Quercus lobata
RcHm_v2.0_Chr7g0202111 Rosa chinensis
Rhsim02G0171900 Rhododendron simsii
Sabra07G0082300 Salix brachista
SalBow7G0499 Salvia bowleyana
SalBow8G4137 Salvia bowleyana
SalBow8G5220 Salvia bowleyana
Sc16g0009670 Simmondsia chinensis
Sed0028082 Sechium edule
SEGI_30894 Sequoiadendron giganteum
SEGI_31237 Sequoiadendron giganteum
SGA_v2.0_scaffold143G35715 Striga asiatica
SMO172G0167 Selaginella moellendorffii
Solyc03g043750.3 Solanum lycopersicum
Sopen03g007600 Solanum pennellii
Sp6g34130 Schrenkiella parvula
TAR376G0453 Trochodendron aralioides
THA.LOC104819353 Tarenaya hassleriana
Thecc.01G141800 Theobroma cacao
Thhalv10013258m.g Eutrema salsugineum
TPR.G37385 Trifolium pratense
TWI75G0452 Tripterygium wilfordii
unitig_899.g14454 Utricularia gibba
vmacro11024 Vaccinium macrocarpon
VMungo0251G2607 Vigna mungo
Zm00001eb373110 Zea mays

User provided reference genes

Program Settings