Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p39560 Brassica napus
A09p04230 Brassica napus
Aa31LG4G12590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis
Actinidia16265 Actinidia chinensis
AL5G20530 Arabidopsis lyrata
Aqoxy1G00065 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea
AT3G32930 Arabidopsis thaliana
ATR0598G038 Amborella trichopoda
Atru.chr3.2259 Acer truncatum
Atru.chr3.2265 Acer truncatum
AUR62000025 Chenopodium quinoa
AUR62019196 Chenopodium quinoa
BcaB04g19533 Brassica carinata
BcaC04g23807 Brassica carinata
BolC9t53377H Brassica oleracea
BraA06t26871Z Brassica rapa
BraA09t36060Z Brassica rapa
C07p38710 Brassica napus
C09p04470 Brassica napus
CAN.G158.4 Capsicum annuum
CANSAT11G2432 Cannabis sativa
CARHR153570 Cardamine hirsuta
Carub.0003s3500 Capsella rubella
CBR_g50072 Chara braunii
Cc01_g01550 Coffea canephora
CDE06G2606 Ceratophyllum demersum
CDE07G1106 Ceratophyllum demersum
Ciclev10016391m.g Citrus clementina
CiPaw.13G173100 Carya illinoinensis
ClCG03G013990 Citrullus lanatus
ClCG08G005770 Citrullus lanatus
Cpa.g.sc119.81 Carica papaya
CsaV3_1G042230 Cucumis sativus L.
CSS0028438 Camellia sinensis var. sinensis
CSS0031266 Camellia sinensis var. sinensis
CSS0049555 Camellia sinensis var. sinensis
DCAR_001992 Daucus carota
Dinv08842 Davidia involucrata
Dinv13426 Davidia involucrata
Dinv15017 Davidia involucrata
Duzib150G1371 Durio zibethinus
Duzib168G1709 Durio zibethinus
ECA238G4721 Erigeron canadensis
EL10Ac4g10350 Beta vulgaris
Eucgr.B03625 Eucalyptus grandis
FAN11G1794 Fragaria x ananassa
FAN16G1952 Fragaria x ananassa
FAN21G0799 Fragaria x ananassa
FAN25G2838 Fragaria x ananassa
FvH4_3g44830 Fragaria vesca
Glyma.08G315600 Glycine max
Glyma.18G097300 Glycine max
Gohir.A13G213700 Gossypium hirsutum
Gohir.D13G217500 Gossypium hirsutum
Gorai.013G248000 Gossypium raimondii
GSVIVG01025405001 Vitis vinifera
HanXRQChr04g0113321 Helianthus annuus
HanXRQChr07g0196761 Helianthus annuus
HanXRQChr17g0560491 Helianthus annuus
Haze_22985 Corylus avellana
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla
HPP92_009650 Vanilla planifolia
Hund07572 Selenicereus undatus
Lalb_Chr10g0091951 Lupinus albus
Lj1A460T3 Lonicera japonica
Lj6g0000665 Lotus japonicus
Lsat_1_v5_gn_2_101560 Lactuca sativa
Manes.03G088400 Manihot esculenta
Manes.15G105600 Manihot esculenta
Mapoly0048s0070 Marchantia polymorpha
MBI13_g29633_MAGBIO Magnolia biondii
MD08G1205200 Malus domestica
Medtr3g083310 Medicago truncatula
MELO3C015648.2 Cucumis melo
Migut.D02532 Erythranthe guttata
MSTRG.18860 Avicennia marina
Nitab4.5_0000775g0140 Nicotiana tabacum
Nitab4.5_0011368g0030 Nicotiana tabacum
Nn2g15764 Nelumbo nucifera
Nn2g15765 Nelumbo nucifera
Nn7g35935 Nelumbo nucifera
Oeu029372.1 Olea europaea
Os07g0608100 Oryza sativa ssp. japonica
Peaxi162Scf00100g00716 Petunia axillaris
PGR102G1639 Punica granatum
PGSC0003DMG400032183 Solanum tuberosum
Phvul.006G042800 Phaseolus vulgaris
Potri.003G216700 Populus trichocarpa
Pp3c11_23310 Physcomitrium patens
Prupe.1G537200 Prunus persica
Psat5g101200 Pisum sativum
PSO339G5084 Papaver somniferum
PSO384G1580 Papaver somniferum
QL01p007982 Quercus lobata
RcHm_v2.0_Chr5g0081531 Rosa chinensis
Rhsim13G0229700 Rhododendron simsii
Sabra03G0161800 Salix brachista
Sabra06G0010000 Salix brachista
SalBow6G6014 Salvia bowleyana
Sc06g0004300 Simmondsia chinensis
Sed0015335 Sechium edule
SGA_v2.0_scaffold6G03437 Striga asiatica
Solyc01g006020.4 Solanum lycopersicum
Sopen01g002030 Solanum pennellii
Sp2g18300 Schrenkiella parvula
TAR633G0950 Trochodendron aralioides
TAR633G1956 Trochodendron aralioides
THA.LOC104811061 Tarenaya hassleriana
Thecc.09G213100 Theobroma cacao
Thhalv10004835m.g Eutrema salsugineum
TPR.G19330 Trifolium pratense
TWI60G0846 Tripterygium wilfordii
unitig_746.g26630 Utricularia gibba
unitig_899.g15354 Utricularia gibba
vmacro04215 Vaccinium macrocarpon
vmacro22566 Vaccinium macrocarpon
VMungo0540G0449 Vigna mungo
VMungo0540G1370 Vigna mungo
Zm00001eb108920 Zea mays
Zm00001eb327220 Zea mays

User provided reference genes

Program Settings