Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27900 Brassica napus
Aa31LG5G21510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis
Actinidia38108 Actinidia chinensis
Ah.05g167080 Amaranthus hybridus
AL3G24000 Arabidopsis lyrata
Aqoxy6G02596 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea
AT3G12350 Arabidopsis thaliana
ATR0739G201 Amborella trichopoda
Atru.chr13.839 Acer truncatum
AUR62022472 Chenopodium quinoa
AUR62037416 Chenopodium quinoa
BcaB01g02882 Brassica carinata
BcaC01g04786 Brassica carinata
BcaC01g04794 Brassica carinata
BolC3t15688H Brassica oleracea
BraA03t12002Z Brassica rapa
C03p33680 Brassica napus
CAN.G724.31 Capsicum annuum
CAN.G724.32 Capsicum annuum
CANSAT25G0442 Cannabis sativa
CARHR287100 Cardamine hirsuta
Carub.0003s1171 Capsella rubella
Ca_13213_v3 Cicer arietinum L.
CBR_g25752 Chara braunii
Cc10_g05020 Coffea canephora
CDE04G3275 Ceratophyllum demersum
Cfa013771 Carpinus fangiana
Ciclev10001174m.g Citrus clementina
CiPaw.07G174200 Carya illinoinensis
ClCG08G016540 Citrullus lanatus
COL.COLO4_28496 Corchorus olitorius
COL.COLO4_28497 Corchorus olitorius
Cpa.g.sc142.31 Carica papaya
Cpa.g.sc142.34 Carica papaya
CsaV3_2G026070 Cucumis sativus L.
CSS0010458 Camellia sinensis var. sinensis
CSS0024022 Camellia sinensis var. sinensis
CSS0045238 Camellia sinensis var. sinensis
CSS0050369 Camellia sinensis var. sinensis
Dinv44950 Davidia involucrata
Duzib093G0619 Durio zibethinus
ECA247G3150 Erigeron canadensis
EL10Ac1g02373 Beta vulgaris
Eucgr.C01112 Eucalyptus grandis
Eucgr.F00088 Eucalyptus grandis
Eucgr.L02719 Eucalyptus grandis
FAN15G2783 Fragaria x ananassa
FAN20G1244 Fragaria x ananassa
FAN24G0652 Fragaria x ananassa
FAN27G3326 Fragaria x ananassa
FvH4_2g32960 Fragaria vesca
FvH4_3g44630 Fragaria vesca
Glyma.14G089027 Glycine max
Glyma.17G234600 Glycine max
Gohir.A05G210400 Gossypium hirsutum
Gohir.D05G213700 Gossypium hirsutum
Gorai.009G220400 Gossypium raimondii
GSVIVG01009337001 Vitis vinifera
HanXRQChr10g0298611 Helianthus annuus
Haze_22429 Corylus avellana
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla
HPP92_013381 Vanilla planifolia
HPP92_013383 Vanilla planifolia
HPP92_013407 Vanilla planifolia
Hund05295 Selenicereus undatus
Lalb_Chr14g0368151 Lupinus albus
Lj1P1160T24 Lonicera japonica
Lj4A71T64 Lonicera japonica
Lj5g0017088 Lotus japonicus
Lj5P501T7 Lonicera japonica
Lsat_1_v5_gn_1_1301 Lactuca sativa
Manes.18G047100 Manihot esculenta
Mapoly0007s0129 Marchantia polymorpha
MD08G1081200 Malus domestica
Medtr1g017940 Medicago truncatula
MELO3C010800.2 Cucumis melo
Migut.N02786 Erythranthe guttata
Nitab4.5_0000497g0170 Nicotiana tabacum
Nitab4.5_0003725g0070 Nicotiana tabacum
Nn5g30609 Nelumbo nucifera
Oeu016579.1 Olea europaea
Oeu037483.1 Olea europaea
Os12g0511000 Oryza sativa ssp. japonica
PGR083G0013 Punica granatum
PGSC0003DMG400010620 Solanum tuberosum
Phvul.001G028300 Phaseolus vulgaris
Potri.002G117900 Populus trichocarpa
Pp3c15_12240 Physcomitrium patens
Prupe.1G422100 Prunus persica
Psat6g018000 Pisum sativum
PSO541G5960 Papaver somniferum
PSO675G0675 Papaver somniferum
QL04p027551 Quercus lobata
QL05p065459 Quercus lobata
QL12p038177 Quercus lobata
RcHm_v2.0_Chr6g0309741 Rosa chinensis
Rhsim07G0219300 Rhododendron simsii
Sabra02G0092600 Salix brachista
SalBow2G0555 Salvia bowleyana
SalBow4G1020 Salvia bowleyana
Sc26g0004210 Simmondsia chinensis
Sed0007452 Sechium edule
SEGI_04434 Sequoiadendron giganteum
SEGI_30290 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11834 Striga asiatica
Sopen04g031380 Solanum pennellii
Sp6g10510 Schrenkiella parvula
TAR381G0342 Trochodendron aralioides
TAR381G1608 Trochodendron aralioides
TAR623G1335 Trochodendron aralioides
TAR623G1714 Trochodendron aralioides
TAR625G0711 Trochodendron aralioides
TAR628G0857 Trochodendron aralioides
THA.LOC104825780 Tarenaya hassleriana
Thecc.08G088000 Theobroma cacao
Thhalv10028685m.g Eutrema salsugineum
TPR.G13155 Trifolium pratense
TWI56G0563 Tripterygium wilfordii
unitig_8.g4874 Utricularia gibba
unitig_8.g4875 Utricularia gibba
vmacro22049 Vaccinium macrocarpon
VMungo0647G1220 Vigna mungo
Zm00001eb264620 Zea mays

User provided reference genes

Program Settings