Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p40000 Brassica napus
Aa31LG8G4030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis
Actinidia15599 Actinidia chinensis
Actinidia27045 Actinidia chinensis
Actinidia40367 Actinidia chinensis
Ah.13g071980 Amaranthus hybridus
AL3G29970 Arabidopsis lyrata
Aqoxy2G02768 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea
AT3G16990 Arabidopsis thaliana
ATR0796G257 Amborella trichopoda
Atru.chr4.2979 Acer truncatum
Atru.chr4.3023 Acer truncatum
Atru.chr4.3025 Acer truncatum
AUR62016124 Chenopodium quinoa
AUR62041396 Chenopodium quinoa
BcaB04g18916 Brassica carinata
BcaB04g18918 Brassica carinata
BcaB04g18920 Brassica carinata
BcaC01g03797 Brassica carinata
BolC3t17131H Brassica oleracea
BraA03t13148Z Brassica rapa
C03p48530 Brassica napus
CAN.G135.71 Capsicum annuum
CAN.G135.72 Capsicum annuum
CANSAT54G0480 Cannabis sativa
CANSAT78G1173 Cannabis sativa
CARHR092240 Cardamine hirsuta
Carub.0003s1674 Capsella rubella
Ca_21447_v3 Cicer arietinum L.
CBR_g45493 Chara braunii
Cc03_g00960 Coffea canephora
Cfa015332 Carpinus fangiana
Ciclev10005751m.g Citrus clementina
CiPaw.01G139400 Carya illinoinensis
ClCG06G004620 Citrullus lanatus
COL.COLO4_34636 Corchorus olitorius
Cpa.g.sc9.74 Carica papaya
Cre09.g407600 Chlamydomonas reinhardtii
CsaV3_6G022370 Cucumis sativus L.
CSS0012053 Camellia sinensis var. sinensis
DCAR_027007 Daucus carota
DCAR_030477 Daucus carota
Dinv44297 Davidia involucrata
Duzib052G0456 Durio zibethinus
Duzib151G0960 Durio zibethinus
ECA233G0552 Erigeron canadensis
EL10Ac1g02106 Beta vulgaris
EL10Ac3g05469 Beta vulgaris
EL10Ac7g16563 Beta vulgaris
EL10Ac9g22265 Beta vulgaris
Eucgr.A00353 Eucalyptus grandis
FAN07G2163 Fragaria x ananassa
FAN12G2263 Fragaria x ananassa
FvH4_4g19550 Fragaria vesca
Glyma.07G240701 Glycine max
Glyma.17G032700 Glycine max
Gohir.A09G235000 Gossypium hirsutum
Gohir.D09G235800 Gossypium hirsutum
Gorai.006G258900 Gossypium raimondii
GSVIVG01035010001 Vitis vinifera
HanXRQChr13g0395571 Helianthus annuus
Haze_01283 Corylus avellana
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla
HPP92_001241 Vanilla planifolia
Hund11963 Selenicereus undatus
Lalb_Chr13g0298441 Lupinus albus
Lalb_Chr20g0120881 Lupinus albus
Lalb_Chr20g0120891 Lupinus albus
Lj4g0019910 Lotus japonicus
Lju470A16T21 Lonicera japonica
Lsat_1_v5_gn_6_16821 Lactuca sativa
Manes.03G203000 Manihot esculenta
Mapoly0003s0261 Marchantia polymorpha
MBI19_g07237_MAGBIO Magnolia biondii
MD16G1155500 Malus domestica
Medtr4g121940 Medicago truncatula
MELO3C021273.2 Cucumis melo
Migut.N00046 Erythranthe guttata
MSTRG.24817 Avicennia marina
Nitab4.5_0001807g0060 Nicotiana tabacum
Nitab4.5_0001807g0070 Nicotiana tabacum
Nitab4.5_0002259g0050 Nicotiana tabacum
Nn3g21692 Nelumbo nucifera
Oeu019970.1 Olea europaea
Os03g0306900 Oryza sativa ssp. japonica
Peaxi162Scf00244g00413 Petunia axillaris
Peaxi162Scf00244g00510 Petunia axillaris
PGR031G3552 Punica granatum
PGSC0003DMG400027315 Solanum tuberosum
PGSC0003DMG400040588 Solanum tuberosum
Phvul.003G113400 Phaseolus vulgaris
Potri.008G106600 Populus trichocarpa
Pp3c10_15580 Physcomitrium patens
Prupe.1G119400 Prunus persica
Psat4g024200 Pisum sativum
Psat4g024280 Pisum sativum
PSO170G6693 Papaver somniferum
PSO357G0527 Papaver somniferum
QL06p011774 Quercus lobata
RcHm_v2.0_Chr4g0424801 Rosa chinensis
Rhsim04G0234900 Rhododendron simsii
Sabra08G0080400 Salix brachista
SalBow5G5236 Salvia bowleyana
Sc25g0003310 Simmondsia chinensis
Sed0017771 Sechium edule
SEGI_24166 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32659 Striga asiatica
SHI00180 Sapria himalayana
SMO116G0484 Selaginella moellendorffii
Solyc11g007560.2 Solanum lycopersicum
Solyc11g007570.2 Solanum lycopersicum
Sopen11g003410 Solanum pennellii
Sp3g15210 Schrenkiella parvula
TAR362G0340 Trochodendron aralioides
TAR636G2967 Trochodendron aralioides
THA.LOC104802603 Tarenaya hassleriana
Thecc.04G298700 Theobroma cacao
Thhalv10021446m.g Eutrema salsugineum
TPR.G20694 Trifolium pratense
TWI09G0431 Tripterygium wilfordii
vmacro08057 Vaccinium macrocarpon
VMungo1215G3118 Vigna mungo
Zm00001eb396140 Zea mays

User provided reference genes

Program Settings