Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p14640 Brassica napus
Aa31LG3G13120 Aethionema arabicum
Actinidia01283 Actinidia chinensis
Ah.12g059430 Amaranthus hybridus
AL8G33200 Arabidopsis lyrata
Aqoxy108s003 Aquilegia oxysepala
Aqoxy3G01064 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea
AT5G57230 Arabidopsis thaliana
ATR1152G025 Amborella trichopoda
Atru.chr7.791 Acer truncatum
AUR62030694 Chenopodium quinoa
AUR62030699 Chenopodium quinoa
AUR62036340 Chenopodium quinoa
BcaB05g22329 Brassica carinata
BcaB08g36085 Brassica carinata
BcaC04g19986 Brassica carinata
BolC2t07570H Brassica oleracea
BolC9t57758H Brassica oleracea
BraA10t43551Z Brassica rapa
C02p14450 Brassica napus
C09p49090 Brassica napus
CAN.G279.32 Capsicum annuum
CAN.G547.21 Capsicum annuum
CANSAT11G0316 Cannabis sativa
CARHR271020 Cardamine hirsuta
Carub.0008s1773 Capsella rubella
Ca_14974_v3 Cicer arietinum L.
CBR_g19745 Chara braunii
Cc06_g21570 Coffea canephora
CDE06G2300 Ceratophyllum demersum
Ciclev10008911m.g Citrus clementina
CiPaw.08G033200 Carya illinoinensis
COL.COLO4_07534 Corchorus olitorius
COL.COLO4_27457 Corchorus olitorius
COL.COLO4_32845 Corchorus olitorius
Cpa.g.sc95.16 Carica papaya
CsaV3_3G025050 Cucumis sativus L.
CSS0019729 Camellia sinensis var. sinensis
CSS0021189 Camellia sinensis var. sinensis
CSS0046955 Camellia sinensis var. sinensis
DCAR_005801 Daucus carota
Dinv25432 Davidia involucrata
Duzib251G0486 Durio zibethinus
ECA234G0872 Erigeron canadensis
ECA240G2363 Erigeron canadensis
EL10Ac5g11827 Beta vulgaris
Eucgr.C00122 Eucalyptus grandis
FAN07G2214 Fragaria x ananassa
FAN12G2844 Fragaria x ananassa
FAN17G2672 Fragaria x ananassa
FAN22G1279 Fragaria x ananassa
FvH4_4g07380 Fragaria vesca
Glyma.01G110600 Glycine max
Glyma.03G076300 Glycine max
Gohir.A06G171500 Gossypium hirsutum
Gohir.D06G179600 Gossypium hirsutum
Gorai.010G210200 Gossypium raimondii
GSVIVG01010872001 Vitis vinifera
HanXRQChr03g0068421 Helianthus annuus
HanXRQChr16g0529271 Helianthus annuus
Haze_22010 Corylus avellana
HPP92_002000 Vanilla planifolia
Hund14984 Selenicereus undatus
Lalb_Chr04g0263391 Lupinus albus
Lj6A100T20 Lonicera japonica
Lj6A87G16 Lonicera japonica
Lj6g0010246 Lotus japonicus
Lsat_1_v5_gn_7_55681 Lactuca sativa
Manes.02G106300 Manihot esculenta
Mapoly0003s0169 Marchantia polymorpha
Mapoly0003s0233 Marchantia polymorpha
MBI17_g07973_MAGBIO Magnolia biondii
MD13G1243200 Malus domestica
MD16G1249800 Malus domestica
Medtr3g465100 Medicago truncatula
MELO3C012967.2 Cucumis melo
Migut.G01073 Erythranthe guttata
Migut.L01889 Erythranthe guttata
MSTRG.10445 Avicennia marina
Nitab4.5_0000366g0180 Nicotiana tabacum
Nitab4.5_0002365g0010 Nicotiana tabacum
Nn2g12444 Nelumbo nucifera
Oeu030095.1 Olea europaea
Oeu044678.1 Olea europaea
Os06g0482200 Oryza sativa ssp. japonica
Os10g0162834 Oryza sativa ssp. japonica
Peaxi162Scf00324g00017 Petunia axillaris
PGR142G1933 Punica granatum
PGSC0003DMG400028738 Solanum tuberosum
Phvul.003G138800 Phaseolus vulgaris
Phvul.003G139178 Phaseolus vulgaris
Phvul.006G013600 Phaseolus vulgaris
Potri.006G076300 Populus trichocarpa
Potri.018G143500 Populus trichocarpa
Pp3c22_13020 Physcomitrium patens
Prupe.1G076700 Prunus persica
Psat2g182520 Pisum sativum
Psat4g027120 Pisum sativum
Psat5g235880 Pisum sativum
PSO339G6079 Papaver somniferum
PSO384G3851 Papaver somniferum
PSO541G2755 Papaver somniferum
QL02p047686 Quercus lobata
RcHm_v2.0_Chr4g0399821 Rosa chinensis
Rhsim01G0118600 Rhododendron simsii
Sabra06G0057200 Salix brachista
Sc03g0007150 Simmondsia chinensis
Sed0024765 Sechium edule
SEGI_34333 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09650 Striga asiatica
Solyc07g008910.3 Solanum lycopersicum
Sopen00g012850 Solanum pennellii
Sp6g18970 Schrenkiella parvula
TAR622G0244 Trochodendron aralioides
TAR629G2308 Trochodendron aralioides
THA.LOC104817778 Tarenaya hassleriana
Thecc.09G184700 Theobroma cacao
Thhalv10014893m.g Eutrema salsugineum
TPR.G32885 Trifolium pratense
TWI60G1509 Tripterygium wilfordii
unitig_736.g22252 Utricularia gibba
vmacro20823 Vaccinium macrocarpon
VMungo0540G0928 Vigna mungo
Zm00001eb161640 Zea mays

User provided reference genes

Program Settings