Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17730 Brassica napus
A07p14980 Brassica napus
A08p28870 Brassica napus
Aa31LG4G7370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis
Actinidia29484 Actinidia chinensis
Ah.01g020580 Amaranthus hybridus
AL2G37550 Arabidopsis lyrata
Aqoxy1G01739 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea
AT1G77350 Arabidopsis thaliana
ATR1101G062 Amborella trichopoda
Atru.chr13.1550 Acer truncatum
AUR62016336 Chenopodium quinoa
BcaB03g14259 Brassica carinata
BcaB03g14260 Brassica carinata
BcaB07g32159 Brassica carinata
BcaC05g26083 Brassica carinata
BcaC06g34898 Brassica carinata
BolC5t30761H Brassica oleracea
BolC7t42733H Brassica oleracea
BolC8t49735H Brassica oleracea
BraA06t24865Z Brassica rapa
BraA07t29244Z Brassica rapa
BraA08t34818Z Brassica rapa
C07p22030 Brassica napus
C08p20980 Brassica napus
CAN.G342.14 Capsicum annuum
CANSAT35G0412 Cannabis sativa
CARHR070830 Cardamine hirsuta
Carub.0002s2423 Capsella rubella
CBR_g12067 Chara braunii
Cc10_g12550 Coffea canephora
CDE06G2198 Ceratophyllum demersum
CDE07G1891 Ceratophyllum demersum
Cfa018120 Carpinus fangiana
Ciclev10002865m.g Citrus clementina
CiPaw.15G032500 Carya illinoinensis
ClCG08G005990 Citrullus lanatus
COL.COLO4_05688 Corchorus olitorius
Cpa.g.sc64.145 Carica papaya
CsaV3_6G034090 Cucumis sativus L.
CSS0006686 Camellia sinensis var. sinensis
CSS0008085 Camellia sinensis var. sinensis
CSS0027136 Camellia sinensis var. sinensis
CSS0043705 Camellia sinensis var. sinensis
DCAR_018876 Daucus carota
Dinv14667 Davidia involucrata
Dinv27277 Davidia involucrata
Duzib041G0795 Durio zibethinus
Duzib116G0606 Durio zibethinus
ECA246G3352 Erigeron canadensis
EL10Ac9g21899 Beta vulgaris
Eucgr.D00248 Eucalyptus grandis
FAN15G1039 Fragaria x ananassa
FAN20G1754 Fragaria x ananassa
FAN24G3505 Fragaria x ananassa
FAN27G3154 Fragaria x ananassa
FvH4_2g27730 Fragaria vesca
Glyma.04G246100 Glycine max
Glyma.06G116700 Glycine max
Gohir.A02G071601 Gossypium hirsutum
Gohir.A05G237800 Gossypium hirsutum
Gohir.D05G239800 Gossypium hirsutum
Gorai.009G248700 Gossypium raimondii
GSVIVG01036785001 Vitis vinifera
HanXRQChr05g0148711 Helianthus annuus
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla
HPP92_021212 Vanilla planifolia
Lalb_Chr08g0241161 Lupinus albus
Lalb_Chr23g0271161 Lupinus albus
Lj1g0010212 Lotus japonicus
Lsat_1_v5_gn_6_109060 Lactuca sativa
Manes.02G167400 Manihot esculenta
Manes.18G081900 Manihot esculenta
Mapoly0014s0111 Marchantia polymorpha
MBI03_g35425_MAGBIO Magnolia biondii
MBI06_g36652_MAGBIO Magnolia biondii
Medtr3g088525 Medicago truncatula
MELO3C010655.2 Cucumis melo
Migut.N03266 Erythranthe guttata
MSTRG.25364 Avicennia marina
Nitab4.5_0001168g0010 Nicotiana tabacum
Nitab4.5_0002045g0100 Nicotiana tabacum
Nn1g09356 Nelumbo nucifera
Nn7g37402 Nelumbo nucifera
Oeu021883.1 Olea europaea
Oeu051968.1 Olea europaea
Os05g0486200 Oryza sativa ssp. japonica
Peaxi162Scf01003g00121 Petunia axillaris
PGR044G1554 Punica granatum
PGSC0003DMG400006049 Solanum tuberosum
Phvul.009G129100 Phaseolus vulgaris
Potri.019G066600 Populus trichocarpa
Prupe.1G490600 Prunus persica
Psat5g085080 Pisum sativum
QL05p046423 Quercus lobata
QL09p032738 Quercus lobata
RcHm_v2.0_Chr6g0296581 Rosa chinensis
Rhsim11G0071000 Rhododendron simsii
Sabra19G0078300 Salix brachista
SalBow2G0856 Salvia bowleyana
Sc10g0008060 Simmondsia chinensis
Sed0004620 Sechium edule
Sed0014816 Sechium edule
SGA_v2.0_scaffold25G11134 Striga asiatica
SGA_v2.0_scaffold28G11977 Striga asiatica
SHI09189 Sapria himalayana
SMO298G0052 Selaginella moellendorffii
Solyc11g005000.2 Solanum lycopersicum
Sopen11g001020 Solanum pennellii
Sp1g19190 Schrenkiella parvula
TAR375G0871 Trochodendron aralioides
THA.LOC104813677 Tarenaya hassleriana
Thecc.08G132100 Theobroma cacao
Thhalv10009123m.g Eutrema salsugineum
Thhalv10019323m.g Eutrema salsugineum
TWI32G0551 Tripterygium wilfordii
TWI34G0863 Tripterygium wilfordii
unitig_22.g5398 Utricularia gibba
unitig_8.g3836 Utricularia gibba
vmacro00858 Vaccinium macrocarpon
vmacro16444 Vaccinium macrocarpon
VMungo1309G0699 Vigna mungo
Zm00001eb128810 Zea mays

User provided reference genes

Program Settings