Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p05350 Brassica napus
Aa31LG11G9280 Aethionema arabicum
Aa31LG11G9290 Aethionema arabicum
Aa31LG11G9300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1535 Anthoceros agrestis
Actinidia05703 Actinidia chinensis
Actinidia23634 Actinidia chinensis
Ah.06g189370 Amaranthus hybridus
AL6G39450 Arabidopsis lyrata
Aqoxy6G00442 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9IE074 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SMKB8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3AGRQ Arachis hypogaea
AT5G27560 Arabidopsis thaliana
ATR1120G073 Amborella trichopoda
Atru.chr2.406 Acer truncatum
AUR62000828 Chenopodium quinoa
AUR62005146 Chenopodium quinoa
BolC9t53510H Brassica oleracea
BraA09t36173Z Brassica rapa
C09p05830 Brassica napus
CAN.G1034.11 Capsicum annuum
CARHR186120 Cardamine hirsuta
Carub.0006s2500 Capsella rubella
Ca_10111_v3 Cicer arietinum L.
Cc02_g33440 Coffea canephora
CDE06G2073 Ceratophyllum demersum
Cfa006589 Carpinus fangiana
Ciclev10001688m.g Citrus clementina
CiPaw.07G017800 Carya illinoinensis
ClCG02G015800 Citrullus lanatus
COL.COLO4_13471 Corchorus olitorius
Cpa.g.sc48.53 Carica papaya
Cre17.g739550 Chlamydomonas reinhardtii
CsaV3_2G005300 Cucumis sativus L.
CSS0039769 Camellia sinensis var. sinensis
DCAR_022164 Daucus carota
Dinv40287 Davidia involucrata
Duzib128G1131 Durio zibethinus
ECA236G1566 Erigeron canadensis
EL10Ac4g09000 Beta vulgaris
EL10Ac4g09351 Beta vulgaris
EL10As4g23462 Beta vulgaris
Eucgr.B01874 Eucalyptus grandis
Eucgr.B01875 Eucalyptus grandis
Eucgr.B01969 Eucalyptus grandis
Eucgr.B01970 Eucalyptus grandis
FAN02G1008 Fragaria x ananassa
FAN05G4943 Fragaria x ananassa
FAN05G5779 Fragaria x ananassa
FAN09G2245 Fragaria x ananassa
FAN14G1304 Fragaria x ananassa
FAN14G3373 Fragaria x ananassa
FvH4_6g05840 Fragaria vesca
Glyma.10G154300 Glycine max
Glyma.20G234000 Glycine max
Gohir.A11G265000 Gossypium hirsutum
Gohir.D11G275200 Gossypium hirsutum
Gorai.007G297000 Gossypium raimondii
GSVIVG01000051001 Vitis vinifera
HanXRQChr02g0046151 Helianthus annuus
Haze_04196 Corylus avellana
Hma1.2p1_0928F.1_g237790 Hydrangea macrophylla
HPP92_002820 Vanilla planifolia
HPP92_002878 Vanilla planifolia
HPP92_002889 Vanilla planifolia
Hund07070 Selenicereus undatus
Lalb_Chr02g0148251 Lupinus albus
Lj5A470G9 Lonicera japonica
Lj5A532G11 Lonicera japonica
Lj5A532G12 Lonicera japonica
Lj5A533G15 Lonicera japonica
Lj5C470G0 Lonicera japonica
Lj5C532G5 Lonicera japonica
Lj5g0002172 Lotus japonicus
Lj5P469T8 Lonicera japonica
Lj5P531T4 Lonicera japonica
Lsat_1_v5_gn_9_86000 Lactuca sativa
Manes.09G167100 Manihot esculenta
Mapoly0046s0092 Marchantia polymorpha
MBI01_g44539_MAGBIO Magnolia biondii
MCO15G525 Micromonas commoda
MD12G1219300 Malus domestica
Medtr1g082900 Medicago truncatula
MELO3C004257.2 Cucumis melo
Migut.B01035 Erythranthe guttata
MSTRG.16964 Avicennia marina
Nitab4.5_0000137g0320 Nicotiana tabacum
Nitab4.5_0004395g0040 Nicotiana tabacum
Nn6g32180 Nelumbo nucifera
Oeu020852.1 Olea europaea
Os06g0146300 Oryza sativa ssp. japonica
Peaxi162Scf00037g00325 Petunia axillaris
PGR083G2010 Punica granatum
PGSC0003DMG400018995 Solanum tuberosum
Phvul.007G180000 Phaseolus vulgaris
Potri.013G020800 Populus trichocarpa
Pp3c1_23410 Physcomitrium patens
PRCOL_00006277 Prasinoderma coloniale
Prupe.6G325900 Prunus persica
Psat6g151200 Pisum sativum
PSO541G4223 Papaver somniferum
PSO675G8687 Papaver somniferum
QL03p006996 Quercus lobata
RcHm_v2.0_Chr3g0454751 Rosa chinensis
RhsimUnG0225800 Rhododendron simsii
Sabra13G0023200 Salix brachista
SalBow8G0023 Salvia bowleyana
Sc06g0003310 Simmondsia chinensis
Sed0013855 Sechium edule
SEGI_29864 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06358 Striga asiatica
SMO116G0320 Selaginella moellendorffii
Solyc01g098990.4 Solanum lycopersicum
Sopen01g042560 Solanum pennellii
Sp2g20750 Schrenkiella parvula
TAR381G0108 Trochodendron aralioides
THA.LOC104818698 Tarenaya hassleriana
Thecc.05G303200 Theobroma cacao
Thhalv10004542m.g Eutrema salsugineum
TPR.G6112 Trifolium pratense
TWI36G1375 Tripterygium wilfordii
unitig_37.g12631 Utricularia gibba
vmacro05019 Vaccinium macrocarpon
VMungo0720G2927 Vigna mungo
Zm00001eb377150 Zea mays

User provided reference genes

Program Settings