Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23400 Brassica napus
A09p44660 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis
Actinidia28758 Actinidia chinensis
Actinidia35692 Actinidia chinensis
Ah.12g058670 Amaranthus hybridus
AL5G31950 Arabidopsis lyrata
Aqoxy6G03048 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea
AT3G51510 Arabidopsis thaliana
ATR0605G230 Amborella trichopoda
Atru.chr2.1887 Acer truncatum
AUR62031725 Chenopodium quinoa
AUR62032612 Chenopodium quinoa
AUR62037337 Chenopodium quinoa
BcaB01g00508 Brassica carinata
BcaNung00380 Brassica carinata
BolC1t02835H Brassica oleracea
BolC8t50289H Brassica oleracea
BraA01t02247Z Brassica rapa
BraA09t39926Z Brassica rapa
C01p29030 Brassica napus
C08p26760 Brassica napus
CAN.G883.25 Capsicum annuum
CANSAT21G2119 Cannabis sativa
CARHR161090 Cardamine hirsuta
Carub.0005s1789 Capsella rubella
Ca_08638_v3 Cicer arietinum L.
CBR_g16852 Chara braunii
Cc07_g12330 Coffea canephora
CDE07G0026 Ceratophyllum demersum
Cfa007119 Carpinus fangiana
Ciclev10012864m.g Citrus clementina
CiPaw.08G182900 Carya illinoinensis
ClCG01G025710 Citrullus lanatus
COL.COLO4_27421 Corchorus olitorius
Cpa.g.sc178.37 Carica papaya
Cre16.g679300 Chlamydomonas reinhardtii
CsaV3_6G052950 Cucumis sativus L.
CSS0005301 Camellia sinensis var. sinensis
CSS0013138 Camellia sinensis var. sinensis
CSS0018042 Camellia sinensis var. sinensis
CSS0026635 Camellia sinensis var. sinensis
DCAR_016700 Daucus carota
Dinv24398 Davidia involucrata
Dinv28290 Davidia involucrata
ECA246G0189 Erigeron canadensis
EL10Ac2g02752 Beta vulgaris
Eucgr.J02573 Eucalyptus grandis
FAN19G0451 Fragaria x ananassa
FAN23G0139 Fragaria x ananassa
FAN23G0893 Fragaria x ananassa
FAN23G3058 Fragaria x ananassa
FAN26G2993 Fragaria x ananassa
FAN28G0218 Fragaria x ananassa
FvH4_1g09790 Fragaria vesca
Glyma.03G158200 Glycine max
Glyma.19G160500 Glycine max
Gohir.A13G006700 Gossypium hirsutum
Gohir.D13G006900 Gossypium hirsutum
Gorai.013G007100 Gossypium raimondii
GSVIVG01026613001 Vitis vinifera
HanXRQChr16g0532211 Helianthus annuus
Haze_03648 Corylus avellana
Haze_11101 Corylus avellana
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla
HPP92_005603 Vanilla planifolia
Hund13396 Selenicereus undatus
Lalb_Chr01g0019941 Lupinus albus
Lj1g0018795 Lotus japonicus
Lj2A507T48 Lonicera japonica
Lsat_1_v5_gn_3_68340 Lactuca sativa
Manes.01G158400 Manihot esculenta
Manes.02G117611 Manihot esculenta
Mapoly0072s0008 Marchantia polymorpha
MBI04_g11525_MAGBIO Magnolia biondii
MCO03G312 Micromonas commoda
MD02G1107600 Malus domestica
MD15G1226900 Malus domestica
Medtr7g095930 Medicago truncatula
MELO3C007014.2 Cucumis melo
Migut.K01209 Erythranthe guttata
MSTRG.3652 Avicennia marina
Nitab4.5_0003141g0020 Nicotiana tabacum
Nitab4.5_0003878g0040 Nicotiana tabacum
Nn6g34643 Nelumbo nucifera
Oeu024786.1 Olea europaea
Os05g0490900 Oryza sativa ssp. japonica
Peaxi162Scf00981g00214 Petunia axillaris
PGR102G2008 Punica granatum
Phvul.001G155800 Phaseolus vulgaris
Potri.001G455900 Populus trichocarpa
Potri.011G146200 Populus trichocarpa
Pp3c12_25230 Physcomitrium patens
PRCOL_00002065 Prasinoderma coloniale
Prupe.7G188400 Prunus persica
Psat3g060840 Pisum sativum
PSO541G2566 Papaver somniferum
PSO675G2564 Papaver somniferum
QL06p053470 Quercus lobata
QL11p010710 Quercus lobata
RcHm_v2.0_Chr2g0096661 Rosa chinensis
Rhsim08G0025300 Rhododendron simsii
Sabra16G0308500 Salix brachista
SalBow5G1176 Salvia bowleyana
Sc10g0004590 Simmondsia chinensis
Sed0011609 Sechium edule
SEGI_12518 Sequoiadendron giganteum
SGA_v2.0_scaffold132G34566 Striga asiatica
SMO356G0733 Selaginella moellendorffii
Solyc02g068270.4 Solanum lycopersicum
Sopen02g017370 Solanum pennellii
Sp5g10730 Schrenkiella parvula
TAR376G0343 Trochodendron aralioides
THA.LOC104808852 Tarenaya hassleriana
THA.LOC104815359 Tarenaya hassleriana
Thecc.05G202100 Theobroma cacao
Thhalv10010756m.g Eutrema salsugineum
TPR.G19116 Trifolium pratense
TWI34G0319 Tripterygium wilfordii
unitig_748.g7258 Utricularia gibba
vmacro18480 Vaccinium macrocarpon
VMungo1383G0261 Vigna mungo
Zm00001eb291320 Zea mays

User provided reference genes

Program Settings