Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p20840 Brassica napus
A04p20870 Brassica napus
Aa31LG5G8700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis
Actinidia07269 Actinidia chinensis
Actinidia24237 Actinidia chinensis
AL4G21210 Arabidopsis lyrata
Aqoxy4G02682 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea
AT2G27290 Arabidopsis thaliana
ATR0772G022 Amborella trichopoda
Atru.chr3.3143 Acer truncatum
AUR62001536 Chenopodium quinoa
AUR62020246 Chenopodium quinoa
BcaB01g03062 Brassica carinata
BcaB01g03063 Brassica carinata
BcaB06g28139 Brassica carinata
BcaB06g28142 Brassica carinata
BcaC02g08251 Brassica carinata
BcaC02g08253 Brassica carinata
BolC4t27194H Brassica oleracea
BolC4t27200H Brassica oleracea
BraA04t17657Z Brassica rapa
C04p56680 Brassica napus
CAN.G745.31 Capsicum annuum
CANSAT54G0913 Cannabis sativa
CARHR119830 Cardamine hirsuta
Carub.0004s0790 Capsella rubella
Ca_19458_v3 Cicer arietinum L.
Ca_29924_v3 Cicer arietinum L.
CBR_g30935 Chara braunii
Cc01_g08620 Coffea canephora
CDE02G3359 Ceratophyllum demersum
CDE08G1250 Ceratophyllum demersum
Cfa009969 Carpinus fangiana
Ciclev10029330m.g Citrus clementina
CiPaw.13G131700 Carya illinoinensis
ClCG02G022370 Citrullus lanatus
COL.COLO4_22654 Corchorus olitorius
Cpa.g.sc195.39 Carica papaya
Cre12.g485850 Chlamydomonas reinhardtii
CsaV3_6G038500 Cucumis sativus L.
CSS0008256 Camellia sinensis var. sinensis
CSS0012591 Camellia sinensis var. sinensis
DCAR_010317 Daucus carota
Dinv05953 Davidia involucrata
Duzib150G1639 Durio zibethinus
ECA238G1364 Erigeron canadensis
EL10Ac7g16320 Beta vulgaris
Eucgr.J00538 Eucalyptus grandis
FAN11G0814 Fragaria x ananassa
FAN16G2986 Fragaria x ananassa
FAN21G2836 Fragaria x ananassa
FAN25G1023 Fragaria x ananassa
FvH4_3g25980 Fragaria vesca
Glyma.11G180200 Glycine max
Glyma.12G093300 Glycine max
Gohir.A07G112050 Gossypium hirsutum
Gohir.A09G097700 Gossypium hirsutum
Gohir.D07G115550 Gossypium hirsutum
Gohir.D09G097500 Gossypium hirsutum
Gorai.001G123800 Gossypium raimondii
Gorai.006G114200 Gossypium raimondii
GSVIVG01036060001 Vitis vinifera
HanXRQChr14g0433141 Helianthus annuus
Haze_23330 Corylus avellana
HPP92_023073 Vanilla planifolia
Hund20941 Selenicereus undatus
Lalb_Chr01g0004961 Lupinus albus
Lalb_Chr03g0028331 Lupinus albus
Lj1A261G25 Lonicera japonica
Lj3g0006801 Lotus japonicus
Lsat_1_v5_gn_2_35940 Lactuca sativa
Manes.11G165200 Manihot esculenta
Mapoly0006s0182 Marchantia polymorpha
MBI17_g18935_MAGBIO Magnolia biondii
MCO12G429 Micromonas commoda
MD03G1152600 Malus domestica
MD11G1172600 Malus domestica
Medtr4g052010 Medicago truncatula
MELO3C014513.2 Cucumis melo
Migut.D02415 Erythranthe guttata
MSTRG.18783 Avicennia marina
MSTRG.21022 Avicennia marina
Nitab4.5_0000893g0010 Nicotiana tabacum
Nitab4.5_0001135g0160 Nicotiana tabacum
Nn2g14263 Nelumbo nucifera
Oeu048845.1 Olea europaea
Os04g0416000 Oryza sativa ssp. japonica
Peaxi162Scf00224g00818 Petunia axillaris
PGR119G0707 Punica granatum
PGSC0003DMG400019619 Solanum tuberosum
Phvul.011G097600 Phaseolus vulgaris
Potri.009G161800 Populus trichocarpa
Pp3c14_19090 Physcomitrium patens
PRCOL_00001321 Prasinoderma coloniale
Prupe.6G139600 Prunus persica
Psat7g187040 Pisum sativum
PSO339G0926 Papaver somniferum
PSO384G4643 Papaver somniferum
QL01p011364 Quercus lobata
QL01p011627 Quercus lobata
RcHm_v2.0_Chr5g0047271 Rosa chinensis
Rhsim01G0202100 Rhododendron simsii
Sabra09G0126500 Salix brachista
SalBow6G1677 Salvia bowleyana
Sc21g0006890 Simmondsia chinensis
Sed0028181 Sechium edule
SEGI_25108 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31957 Striga asiatica
SGA_v2.0_scaffold7G03983 Striga asiatica
SMO146G0331 Selaginella moellendorffii
Solyc11g068790.2 Solanum lycopersicum
Sopen11g027510 Solanum pennellii
Sp4g10100 Schrenkiella parvula
TAR623G0571 Trochodendron aralioides
THA.LOC104826442 Tarenaya hassleriana
Thecc.09G276000 Theobroma cacao
Thhalv10002100m.g Eutrema salsugineum
TPR.G4615 Trifolium pratense
TWI31G0202 Tripterygium wilfordii
unitig_0.g1470 Utricularia gibba
vmacro14327 Vaccinium macrocarpon
VMungo1127G2206 Vigna mungo
Zm00001eb422070 Zea mays

User provided reference genes

Program Settings