Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09980 Brassica napus
A08p13440 Brassica napus
Aa31LG6G690 Aethionema arabicum
Actinidia03362 Actinidia chinensis
Actinidia09184 Actinidia chinensis
Actinidia14793 Actinidia chinensis
Actinidia25977 Actinidia chinensis
Ah.07g200600 Amaranthus hybridus
AL7G36570 Arabidopsis lyrata
Aqoxy3G02279 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea
AT4G17940 Arabidopsis thaliana
ATR0665G126 Amborella trichopoda
Atru.chr6.1649 Acer truncatum
AUR62018697 Chenopodium quinoa
BcaB04g18451 Brassica carinata
BcaC07g38109 Brassica carinata
BcaC09g51583 Brassica carinata
BcaNung00042 Brassica carinata
BolC1t01140H Brassica oleracea
BolC8t48532H Brassica oleracea
BraA01t00942Z Brassica rapa
BraA08t33321Z Brassica rapa
C01p11780 Brassica napus
CAN.G298.28 Capsicum annuum
CANSAT21G0851 Cannabis sativa
CARHR224680 Cardamine hirsuta
Carub.0007s2340 Capsella rubella
Ca_25198_v3 Cicer arietinum L.
Cc08_g03010 Coffea canephora
CDE02G1298 Ceratophyllum demersum
CDE06G1171 Ceratophyllum demersum
CDE11G1127 Ceratophyllum demersum
Cfa012467 Carpinus fangiana
CiPaw.11G095600 Carya illinoinensis
CiPaw.12G065800 Carya illinoinensis
ClCG09G011810 Citrullus lanatus
COL.COLO4_16996 Corchorus olitorius
Cpa.g.sc90.63 Carica papaya
CsaV3_3G049010 Cucumis sativus L.
CSS0006923 Camellia sinensis var. sinensis
CSS0048597 Camellia sinensis var. sinensis
DCAR_008251 Daucus carota
Dinv25232 Davidia involucrata
Dinv28973 Davidia involucrata
Duzib084G0468 Durio zibethinus
Duzib205G0324 Durio zibethinus
ECA246G3187 Erigeron canadensis
EL10Ac5g12081 Beta vulgaris
Eucgr.D02211 Eucalyptus grandis
Eucgr.E00267 Eucalyptus grandis
Eucgr.E00268 Eucalyptus grandis
FAN04G1670 Fragaria x ananassa
FAN08G3522 Fragaria x ananassa
FAN18G0493 Fragaria x ananassa
FAN18G3281 Fragaria x ananassa
FvH4_5g22450 Fragaria vesca
Glyma.01G017000 Glycine max
Glyma.09G205800 Glycine max
Gohir.A08G155500 Gossypium hirsutum
Gohir.A11G031400 Gossypium hirsutum
Gohir.D08G176100 Gossypium hirsutum
Gohir.D11G030100 Gossypium hirsutum
Gorai.004G183900 Gossypium raimondii
Gorai.007G033000 Gossypium raimondii
GSVIVG01013133001 Vitis vinifera
HanXRQChr06g0167641 Helianthus annuus
HanXRQChr17g0536151 Helianthus annuus
Haze_08202 Corylus avellana
Hma1.2p1_0303F.1_g118950 Hydrangea macrophylla
Hma1.2p1_1379F.1_g279220 Hydrangea macrophylla
HPP92_014659 Vanilla planifolia
Hund14348 Selenicereus undatus
Lalb_Chr05g0215911 Lupinus albus
Lj2A236G56 Lonicera japonica
Lj2g0018875 Lotus japonicus
Lsat_1_v5_gn_3_18800 Lactuca sativa
Manes.15G192960 Manihot esculenta
MBI04_g20344_MAGBIO Magnolia biondii
MD06G1036900 Malus domestica
Medtr5g029910 Medicago truncatula
MELO3C003424.2 Cucumis melo
Migut.E00791 Erythranthe guttata
MSTRG.13750 Avicennia marina
Nitab4.5_0000025g0350 Nicotiana tabacum
Nitab4.5_0000127g0100 Nicotiana tabacum
Nitab4.5_0001566g0060 Nicotiana tabacum
Nitab4.5_0003625g0020 Nicotiana tabacum
Nn1g00145 Nelumbo nucifera
Nn2g12150 Nelumbo nucifera
Nn3g19447 Nelumbo nucifera
Nn4g23899 Nelumbo nucifera
Oeu006245.1 Olea europaea
Os10g0576600 Oryza sativa ssp. japonica
Peaxi162Scf00184g00001 Petunia axillaris
PGR031G3884 Punica granatum
PGSC0003DMG400017523 Solanum tuberosum
Phvul.002G140000 Phaseolus vulgaris
Potri.001G140500 Populus trichocarpa
Prupe.5G032400 Prunus persica
Psat2g137200 Pisum sativum
PSO063G6445 Papaver somniferum
PSO782G4606 Papaver somniferum
QL12p004739 Quercus lobata
RcHm_v2.0_Chr7g0210241 Rosa chinensis
Rhsim11G0017700 Rhododendron simsii
Sabra01G0109300 Salix brachista
Sed0010075 Sechium edule
SEGI_03197 Sequoiadendron giganteum
SEGI_05061 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09266 Striga asiatica
Solyc08g076730.4 Solanum lycopersicum
Sopen08g025280 Solanum pennellii
Sp7g16170 Schrenkiella parvula
TAR629G1434 Trochodendron aralioides
THA.LOC104806719 Tarenaya hassleriana
THA.LOC104827750 Tarenaya hassleriana
Thecc.03G224800 Theobroma cacao
Thhalv10026016m.g Eutrema salsugineum
TWI15G1132 Tripterygium wilfordii
unitig_699.g19788 Utricularia gibba
vmacro00314 Vaccinium macrocarpon
VMungo1080G0874 Vigna mungo
VMungo1215G2715 Vigna mungo
Zm00001eb024820 Zea mays

User provided reference genes

Program Settings