Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p18900 Brassica napus
Aa31LG2G11310 Aethionema arabicum
Actinidia22855 Actinidia chinensis
Ah.06g190700 Amaranthus hybridus
AL1G67090 Arabidopsis lyrata
Aqoxy2G02488 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea
AT1G57540 Arabidopsis thaliana
ATR0796G010 Amborella trichopoda
Atru.chr12.1543 Acer truncatum
AUR62000475 Chenopodium quinoa
AUR62017099 Chenopodium quinoa
BcaB07g31141 Brassica carinata
BcaC04g22081 Brassica carinata
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus
BolC9t55290H Brassica oleracea
BraA09t37510Z Brassica rapa
C09p23680 Brassica napus
CAN.G637.25 Capsicum annuum
CANSAT54G2801 Cannabis sativa
CARHR288700 Cardamine hirsuta
Carub.0002s0712 Capsella rubella
Ca_10200_v3 Cicer arietinum L.
Cc02_g35850 Coffea canephora
CDE09G0003 Ceratophyllum demersum
Cfa012394 Carpinus fangiana
Ciclev10013195m.g Citrus clementina
CiPaw.04G111200 Carya illinoinensis
CiPaw.07G036200 Carya illinoinensis
ClCG02G014650 Citrullus lanatus
COL.COLO4_16932 Corchorus olitorius
Cpa.g.sc48.50 Carica papaya
CsaV3_2G007320 Cucumis sativus L.
CSS0019637 Camellia sinensis var. sinensis
CSS0033999 Camellia sinensis var. sinensis
DCAR_007528 Daucus carota
Dinv24513 Davidia involucrata
Dinv30948 Davidia involucrata
Duzib205G1677 Durio zibethinus
ECA233G1704 Erigeron canadensis
EL10Ac4g07573 Beta vulgaris
EL10Ac4g09558 Beta vulgaris
FAN02G0285 Fragaria x ananassa
FAN05G1622 Fragaria x ananassa
FAN09G1610 Fragaria x ananassa
FAN14G3239 Fragaria x ananassa
FAN15G2822 Fragaria x ananassa
FAN24G3038 Fragaria x ananassa
FvH4_2g19190 Fragaria vesca
FvH4_6g08490 Fragaria vesca
Glyma.09G093300 Glycine max
Glyma.20G090800 Glycine max
Glyma.20G092200 Glycine max
Gohir.A08G153400 Gossypium hirsutum
Gohir.D08G174300 Gossypium hirsutum
Gorai.004G182000 Gossypium raimondii
GSVIVG01031328001 Vitis vinifera
HanXRQChr06g0180851 Helianthus annuus
HanXRQChr08g0212181 Helianthus annuus
HanXRQChr16g0506271 Helianthus annuus
Haze_03988 Corylus avellana
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla
Hund05518 Selenicereus undatus
Lalb_Chr02g0147551 Lupinus albus
Lalb_Chr21g0310061 Lupinus albus
Lj4g0016187 Lotus japonicus
Lj5g0003279 Lotus japonicus
Lsat_1_v5_gn_1_112940 Lactuca sativa
Manes.09G181100 Manihot esculenta
Mapoly0075s0044 Marchantia polymorpha
MBI06_g06498_MAGBIO Magnolia biondii
MBI18_g10373_MAGBIO Magnolia biondii
MD12G1199900 Malus domestica
Medtr1g484930 Medicago truncatula
MELO3C004152.2 Cucumis melo
Migut.H01672 Erythranthe guttata
Nitab4.5_0000936g0050 Nicotiana tabacum
Nitab4.5_0004454g0020 Nicotiana tabacum
Nn7g36656 Nelumbo nucifera
Oeu061901.1 Olea europaea
Os01g0250600 Oryza sativa ssp. japonica
Peaxi162Scf00171g00731 Petunia axillaris
PGR083G2709 Punica granatum
PGSC0003DMG400031051 Solanum tuberosum
Phvul.007G205000 Phaseolus vulgaris
Potri.005G002900 Populus trichocarpa
Potri.013G002301 Populus trichocarpa
Pp3c8_1240 Physcomitrium patens
Prupe.6G304700 Prunus persica
Prupe.8G045300 Prunus persica
Psat6g155680 Pisum sativum
PSO210G0390 Papaver somniferum
PSO761G0726 Papaver somniferum
QL03p010963 Quercus lobata
RcHm_v2.0_Chr3g0458531 Rosa chinensis
Rhsim11G0104500 Rhododendron simsii
Rhsim11G0105200 Rhododendron simsii
Sabra05G0000300 Salix brachista
Sabra05G0014400 Salix brachista
Sabra13G0001700 Salix brachista
SalBow4G0401 Salvia bowleyana
SalBow4G1963 Salvia bowleyana
SalBow4G2407 Salvia bowleyana
SalBow5G3054 Salvia bowleyana
Sc09g0002420 Simmondsia chinensis
Sc16g0009400 Simmondsia chinensis
Sed0021183 Sechium edule
Solyc03g098120.3 Solanum lycopersicum
Sopen03g028820 Solanum pennellii
Sp1g28800 Schrenkiella parvula
Sp2g05970 Schrenkiella parvula
TAR627G1128 Trochodendron aralioides
TAR636G2194 Trochodendron aralioides
THA.LOC104820476 Tarenaya hassleriana
Thecc.03G310900 Theobroma cacao
Thhalv10010969m.g Eutrema salsugineum
TPR.G2591 Trifolium pratense
TWI36G0052 Tripterygium wilfordii
unitig_62.g23615 Utricularia gibba
vmacro01669 Vaccinium macrocarpon
vmacro16416 Vaccinium macrocarpon
VMungo0720G0633 Vigna mungo
Zm00001eb239560 Zea mays

User provided reference genes

Program Settings