Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22950 Brassica napus
A03p22960 Brassica napus
Aa31LG3G1290 Aethionema arabicum
Actinidia01018 Actinidia chinensis
Actinidia07776 Actinidia chinensis
Actinidia31756 Actinidia chinensis
Ah.10g029650 Amaranthus hybridus
Ah.12g064690 Amaranthus hybridus
AL4G38760 Arabidopsis lyrata
Aqoxy4G03315 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.78S8ZN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8Y6D9P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RI9J7M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SS94V0 Arachis hypogaea
AT2G40815 Arabidopsis thaliana
ATR1127G014 Amborella trichopoda
Atru.chr12.221 Acer truncatum
AUR62031669 Chenopodium quinoa
AUR62032552 Chenopodium quinoa
BcaB01g03513 Brassica carinata
BcaB01g03514 Brassica carinata
BcaC01g00185 Brassica carinata
BcaC01g05374 Brassica carinata
BcaC01g05375 Brassica carinata
BcaC07g39527 Brassica carinata
BolC3t15104H Brassica oleracea
BolC3t15105H Brassica oleracea
BolC3t15106H Brassica oleracea
BraA03t11518Z Brassica rapa
BraA03t11519Z Brassica rapa
C03p27220 Brassica napus
C03p27230 Brassica napus
C03p27240 Brassica napus
CAN.G70.11 Capsicum annuum
CAN.G77.11 Capsicum annuum
CANSAT56G1764 Cannabis sativa
CARHR135930 Cardamine hirsuta
Carub.0004s2313 Capsella rubella
Ca_05544_v3 Cicer arietinum L.
Ca_16847_v3 Cicer arietinum L.
Cc02_g04860 Coffea canephora
Cc02_g05030 Coffea canephora
CDE04G1875 Ceratophyllum demersum
Cfa001179 Carpinus fangiana
Ciclev10033529m.g Citrus clementina
CiPaw.01G088900 Carya illinoinensis
COL.COLO4_19496 Corchorus olitorius
Cpa.g.sc65.81 Carica papaya
Cpa.g.sc65.83 Carica papaya
CSS0034849 Camellia sinensis var. sinensis
CSS0037764 Camellia sinensis var. sinensis
DCAR_018052 Daucus carota
Dinv21870 Davidia involucrata
Dinv34513 Davidia involucrata
Duzib114G0239 Durio zibethinus
ECA233G0944 Erigeron canadensis
EL10Ac2g02693 Beta vulgaris
Eucgr.G03171 Eucalyptus grandis
Eucgr.J00096 Eucalyptus grandis
FAN01G0868 Fragaria x ananassa
FvH4_7g26311 Fragaria vesca
Glyma.02G220300 Glycine max
Glyma.04G224600 Glycine max
Glyma.06G140100 Glycine max
Glyma.14G187500 Glycine max
Gohir.A05G404900 Gossypium hirsutum
Gohir.D04G010800 Gossypium hirsutum
Gorai.012G012900 Gossypium raimondii
GSVIVG01032869001 Vitis vinifera
HanXRQChr14g0441281 Helianthus annuus
Haze_17382 Corylus avellana
HPP92_019043 Vanilla planifolia
Lalb_Chr08g0239321 Lupinus albus
Lalb_Chr10g0102911 Lupinus albus
Lj1g0008062 Lotus japonicus
Lj4g0001384 Lotus japonicus
Lj5g0014241 Lotus japonicus
LjContig00155g0000391 Lotus japonicus
Lsat_1_v5_gn_8_11140 Lactuca sativa
Manes.07G141400 Manihot esculenta
MD01G1172000 Malus domestica
MD07G1238500 Malus domestica
Medtr3g093560 Medicago truncatula
Medtr5g068530 Medicago truncatula
Medtr5g069320 Medicago truncatula
Migut.F00561 Erythranthe guttata
MSTRG.27248 Avicennia marina
Nitab4.5_0000103g0020 Nicotiana tabacum
Nitab4.5_0001493g0020 Nicotiana tabacum
Nn2g10220 Nelumbo nucifera
Oeu001370.1 Olea europaea
Os01g0818100 Oryza sativa ssp. japonica
PGR044G1713 Punica granatum
PGR142G3034 Punica granatum
PGSC0003DMG400005260 Solanum tuberosum
Phvul.008G187400 Phaseolus vulgaris
Phvul.009G041400 Phaseolus vulgaris
Potri.019G065500 Populus trichocarpa
Prupe.2G267300 Prunus persica
Psat2g060080 Pisum sativum
Psat5g070080 Pisum sativum
PSO339G5993 Papaver somniferum
PSO384G0230 Papaver somniferum
QL08p065320 Quercus lobata
RcHm_v2.0_Chr1g0372771 Rosa chinensis
Rhsim09G0187400 Rhododendron simsii
Sabra19G0079000 Salix brachista
SalBow3G4635 Salvia bowleyana
Sc11g0006110 Simmondsia chinensis
SEGI_32602 Sequoiadendron giganteum
SGA_v2.0_scaffold60G20871 Striga asiatica
Solyc03g095300.4 Solanum lycopersicum
Sopen03g025310 Solanum pennellii
Sp4g23140 Schrenkiella parvula
TAR633G2235 Trochodendron aralioides
THA.LOC104824373 Tarenaya hassleriana
Thecc.10G187500 Theobroma cacao
Thhalv10016922m.g Eutrema salsugineum
TPR.G13964 Trifolium pratense
TPR.G27912 Trifolium pratense
TWI09G1245 Tripterygium wilfordii
TWI73G0583 Tripterygium wilfordii
vmacro09945 Vaccinium macrocarpon
VMungo0647G2347 Vigna mungo
VMungo1309G1947 Vigna mungo
Zm00001eb149710 Zea mays

User provided reference genes

Program Settings