Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p10330 Brassica napus
Aa31LG3G9120 Aethionema arabicum
Aa31LG3G9130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3502 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2460 Anthoceros agrestis
Ah.13g069400 Amaranthus hybridus
Ah.13g069420 Amaranthus hybridus
AL8G27340 Arabidopsis lyrata
Aqoxy5G04066 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FS5X82 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1BTLB Arachis hypogaea
AT5G52880 Arabidopsis thaliana
ATR1131G020 Amborella trichopoda
Atru.chr1.326 Acer truncatum
AUR62021081 Chenopodium quinoa
AUR62031450 Chenopodium quinoa
BcaB08g35641 Brassica carinata
BcaB08g35646 Brassica carinata
BcaC04g20531 Brassica carinata
BcaC04g20532 Brassica carinata
BolC9t57127H Brassica oleracea
BolC9t57131H Brassica oleracea
C09p42490 Brassica napus
C09p42540 Brassica napus
CAN.G926.4 Capsicum annuum
CAN.G926.5 Capsicum annuum
CANSAT21G1468 Cannabis sativa
CARHR265820 Cardamine hirsuta
Carub.0008s1304 Capsella rubella
Ca_10706_v3 Cicer arietinum L.
CBR_g45678 Chara braunii
Cc02_g02170 Coffea canephora
CDE08G0346 Ceratophyllum demersum
Cfa016324 Carpinus fangiana
Ciclev10005526m.g Citrus clementina
CiPaw.06G005500 Carya illinoinensis
ClCG01G000830 Citrullus lanatus
ClCG04G002190 Citrullus lanatus
ClCG04G002620 Citrullus lanatus
COL.COLO4_02740 Corchorus olitorius
COL.COLO4_30262 Corchorus olitorius
Cpa.g.sc3.9 Carica papaya
CsaV3_5G000970 Cucumis sativus L.
CSS0007539 Camellia sinensis var. sinensis
CSS0035371 Camellia sinensis var. sinensis
CSS0044760 Camellia sinensis var. sinensis
DCAR_020289 Daucus carota
Duzib084G0050 Durio zibethinus
ECA233G3199 Erigeron canadensis
Eucgr.K00302 Eucalyptus grandis
FAN01G1106 Fragaria x ananassa
FAN06G4689 Fragaria x ananassa
FAN06G4805 Fragaria x ananassa
FAN10G1990 Fragaria x ananassa
FAN10G3235 Fragaria x ananassa
FvH4_7g30600 Fragaria vesca
Glyma.10G229500 Glycine max
Glyma.20G163801 Glycine max
Gohir.A12G254499 Gossypium hirsutum
Gohir.D12G255200 Gossypium hirsutum
Gorai.008G272800 Gossypium raimondii
GSVIVG01028794001 Vitis vinifera
HanXRQChr05g0141161 Helianthus annuus
Hma1.2p1_0142F.1_g064400 Hydrangea macrophylla
Hma1.2p1_0142F.1_g064410 Hydrangea macrophylla
HPP92_009775 Vanilla planifolia
Hund11704 Selenicereus undatus
Lalb_Chr02g0141321 Lupinus albus
Lj1A1009G47 Lonicera japonica
Lj5g0016065 Lotus japonicus
Lsat_1_v5_gn_8_10160 Lactuca sativa
Lsat_1_v5_gn_8_6341 Lactuca sativa
Manes.06G154300 Manihot esculenta
MBI06_g33547_MAGBIO Magnolia biondii
MBI12_g17737_MAGBIO Magnolia biondii
MBI17_g41518_MAGBIO Magnolia biondii
MCO14G272 Micromonas commoda
MD01G1211200 Malus domestica
Medtr1g099490 Medicago truncatula
MELO3C034012.2 Cucumis melo
Migut.F00264 Erythranthe guttata
MSTRG.27066 Avicennia marina
Nitab4.5_0001748g0060 Nicotiana tabacum
Nitab4.5_0008026g0020 Nicotiana tabacum
Nn1g01725 Nelumbo nucifera
Os05g0526300 Oryza sativa ssp. japonica
Peaxi162Scf00057g00026 Petunia axillaris
PGR142G3937 Punica granatum
PGSC0003DMG400019962 Solanum tuberosum
Phvul.007G076000 Phaseolus vulgaris
Potri.012G035500 Populus trichocarpa
Pp3c3_15840 Physcomitrium patens
Pp3c4_17520 Physcomitrium patens
Prupe.2G291600 Prunus persica
Prupe.2G303600 Prunus persica
Prupe.2G304000 Prunus persica
Psat6g195200 Pisum sativum
PSO063G5557 Papaver somniferum
PSO170G4684 Papaver somniferum
QL09p012095 Quercus lobata
RcHm_v2.0_Chr1g0378761 Rosa chinensis
RcHm_v2.0_Chr1g0379101 Rosa chinensis
RcHm_v2.0_Chr1g0379281 Rosa chinensis
RcHm_v2.0_Chr1g0379501 Rosa chinensis
RcHm_v2.0_Chr1g0379511 Rosa chinensis
Rhsim03G0195700 Rhododendron simsii
RhsimUnG0097700 Rhododendron simsii
Sabra12G0024000 Salix brachista
SalBow4G0206 Salvia bowleyana
Sc19g0001030 Simmondsia chinensis
Sed0005488 Sechium edule
SGA_v2.0_scaffold192G40609 Striga asiatica
Solyc03g007750.3 Solanum lycopersicum
Sopen03g003670 Solanum pennellii
Sp6g15040 Schrenkiella parvula
TAR636G3656 Trochodendron aralioides
THA.LOC104825120 Tarenaya hassleriana
Thecc.03G188100 Theobroma cacao
Thhalv10014697m.g Eutrema salsugineum
TPR.G10934 Trifolium pratense
TPR.G7772 Trifolium pratense
TWI39G0038 Tripterygium wilfordii
unitig_92.g28262 Utricularia gibba
vmacro06599 Vaccinium macrocarpon
VMungo0720G2617 Vigna mungo
Zm00001eb293490 Zea mays

User provided reference genes

Program Settings