Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p36730 Brassica napus
A09p05910 Brassica napus
Aa31LG11G10320 Aethionema arabicum
Actinidia40170 Actinidia chinensis
Ah.04g154500 Amaranthus hybridus
AL6G38240 Arabidopsis lyrata
Aqoxy2G03353 Aquilegia oxysepala
Aqoxy5G00502 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KMTU0V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RSQ2PF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S8XWMG Arachis hypogaea
AT5G26230 Arabidopsis thaliana
ATR0626G102 Amborella trichopoda
Atru.chr4.2516 Acer truncatum
AUR62038095 Chenopodium quinoa
AUR62038636 Chenopodium quinoa
BcaB04g19742 Brassica carinata
BcaC04g23610 Brassica carinata
BcaNung02811 Brassica carinata
BcaNung03972 Brassica carinata
BolC7t44712H Brassica oleracea
BolC9t53571H Brassica oleracea
BraA06t26595Z Brassica rapa
BraA09t36233Z Brassica rapa
C07p41810 Brassica napus
C09p06490 Brassica napus
CANSAT78G1152 Cannabis sativa
CARHR187140 Cardamine hirsuta
Carub.0006s2405 Capsella rubella
Ca_24387_v3 Cicer arietinum L.
Cc03_g03480 Coffea canephora
Cfa015618 Carpinus fangiana
Ciclev10005353m.g Citrus clementina
CiPaw.01G163800 Carya illinoinensis
CiPaw.02G095400 Carya illinoinensis
ClCG05G005260 Citrullus lanatus
ClCG05G005270 Citrullus lanatus
ClCG06G006020 Citrullus lanatus
COL.COLO4_06194 Corchorus olitorius
Cpa.g.sc147.34 Carica papaya
CsaV3_3G013490 Cucumis sativus L.
CsaV3_6G038260 Cucumis sativus L.
DCAR_027185 Daucus carota
Dinv38426 Davidia involucrata
Dinv44508 Davidia involucrata
Duzib052G1015 Durio zibethinus
Duzib212G0816 Durio zibethinus
ECA234G3153 Erigeron canadensis
EL10As3g23363 Beta vulgaris
FAN07G1279 Fragaria x ananassa
FAN12G1910 Fragaria x ananassa
FAN17G3084 Fragaria x ananassa
FAN22G0434 Fragaria x ananassa
FvH4_4g15080 Fragaria vesca
Glyma.11G004400 Glycine max
Gohir.A09G214600 Gossypium hirsutum
Gohir.D09G217100 Gossypium hirsutum
Gorai.006G237600 Gossypium raimondii
GSVIVG01017928001 Vitis vinifera
HanXRQChr15g0466041 Helianthus annuus
Haze_00877 Corylus avellana
Hma1.2p1_0517F.1_g171030 Hydrangea macrophylla
HPP92_003595 Vanilla planifolia
Lj1g0001361 Lotus japonicus
Lj6C598T9 Lonicera japonica
Lsat_1_v5_gn_5_148441 Lactuca sativa
Lsat_1_v5_gn_7_65920 Lactuca sativa
Manes.03G181100 Manihot esculenta
Manes.15G026800 Manihot esculenta
MBI17_g34761_MAGBIO Magnolia biondii
MD13G1188500 Malus domestica
MD16G1188900 Malus domestica
Medtr5g005960 Medicago truncatula
MELO3C006546.2 Cucumis melo
MELO3C014489.2 Cucumis melo
Migut.G00317 Erythranthe guttata
MSTRG.24747 Avicennia marina
MSTRG.4016 Avicennia marina
Nitab4.5_0000260g0090 Nicotiana tabacum
Nitab4.5_0007531g0010 Nicotiana tabacum
Nn1g02244 Nelumbo nucifera
Nn2g11148 Nelumbo nucifera
Nn2g12462 Nelumbo nucifera
Nn2g13850 Nelumbo nucifera
Nn3g18017 Nelumbo nucifera
Nn3g18018 Nelumbo nucifera
Nn4g26265 Nelumbo nucifera
Oeu004490.1 Olea europaea
Oeu034363.1 Olea europaea
Os05g0390600 Oryza sativa ssp. japonica
Peaxi162Scf00437g00041 Petunia axillaris
PGR004G2192 Punica granatum
PGSC0003DMG400031852 Solanum tuberosum
Phvul.002G047200 Phaseolus vulgaris
Potri.010G090500 Populus trichocarpa
Prupe.1G155600 Prunus persica
Psat4g211440 Pisum sativum
PSO135G0705 Papaver somniferum
PSO384G0046 Papaver somniferum
PSO675G0548 Papaver somniferum
PSO717G0040 Papaver somniferum
QL06p003344 Quercus lobata
Rhsim04G0205200 Rhododendron simsii
Sabra10G0052900 Salix brachista
SalBow2G0078 Salvia bowleyana
SalBow5G2627 Salvia bowleyana
SalBow5G4234 Salvia bowleyana
Sc13g0004270 Simmondsia chinensis
Sed0009344 Sechium edule
Sed0019333 Sechium edule
SEGI_38862 Sequoiadendron giganteum
SEGI_41537 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05105 Striga asiatica
SGA_v2.0_scaffold257G45734 Striga asiatica
Solyc09g075750.1 Solanum lycopersicum
Sopen09g030560 Solanum pennellii
Sp2g21520 Schrenkiella parvula
TAR365G0083 Trochodendron aralioides
THA.LOC104802760 Tarenaya hassleriana
Thecc.04G227500 Theobroma cacao
Thhalv10004558m.g Eutrema salsugineum
TPR.G37902 Trifolium pratense
TWI09G0488 Tripterygium wilfordii
TWI53G0528 Tripterygium wilfordii
VMungo1215G3149 Vigna mungo
Zm00001eb350820 Zea mays

User provided reference genes

Program Settings